Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Pds5bQ4VA53 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Pds5bQ4VA53 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pds5bQ4VA53 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pds5bQ4VA53 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
Pds5bQ4VA53 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pds5bQ4VA53 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pds5bQ4VA53 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pds5bQ4VA53 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pds5bQ4VA53 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Pds5bQ4VA53 Rprl3-201ENSMUST00000157400 290 ntBASIC30.67■■■□□ 2.5
Pds5bQ4VA53 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Pds5bQ4VA53 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Pds5bQ4VA53 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Pds5bQ4VA53 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Pds5bQ4VA53 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC30.67■■■□□ 2.5
Pds5bQ4VA53 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Pds5bQ4VA53 Gm11336-201ENSMUST00000118168 334 ntBASIC30.66■■■□□ 2.5
Pds5bQ4VA53 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
Pds5bQ4VA53 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Pds5bQ4VA53 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
Pds5bQ4VA53 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
Pds5bQ4VA53 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Pds5bQ4VA53 Tgds-204ENSMUST00000228543 1594 ntBASIC30.66■■■□□ 2.5
Pds5bQ4VA53 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Pds5bQ4VA53 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Pds5bQ4VA53 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pds5bQ4VA53 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
Pds5bQ4VA53 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pds5bQ4VA53 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pds5bQ4VA53 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pds5bQ4VA53 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pds5bQ4VA53 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pds5bQ4VA53 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pds5bQ4VA53 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC30.65■■■□□ 2.5
Pds5bQ4VA53 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pds5bQ4VA53 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
Pds5bQ4VA53 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pds5bQ4VA53 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Pds5bQ4VA53 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Pds5bQ4VA53 Gm13312-201ENSMUST00000119631 718 ntBASIC30.64■■■□□ 2.5
Pds5bQ4VA53 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Pds5bQ4VA53 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Pds5bQ4VA53 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Pds5bQ4VA53 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Pds5bQ4VA53 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC30.64■■■□□ 2.5
Pds5bQ4VA53 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Pds5bQ4VA53 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.49
Pds5bQ4VA53 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC30.64■■■□□ 2.49
Pds5bQ4VA53 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
Pds5bQ4VA53 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
Pds5bQ4VA53 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Pds5bQ4VA53 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC30.63■■■□□ 2.49
Pds5bQ4VA53 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
Pds5bQ4VA53 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
Pds5bQ4VA53 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Pds5bQ4VA53 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Pds5bQ4VA53 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Pds5bQ4VA53 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC30.62■■■□□ 2.49
Pds5bQ4VA53 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC30.62■■■□□ 2.49
Pds5bQ4VA53 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Pds5bQ4VA53 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Pds5bQ4VA53 AC154527.4-201ENSMUST00000224364 1667 ntBASIC30.61■■■□□ 2.49
Pds5bQ4VA53 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Pds5bQ4VA53 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Pds5bQ4VA53 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Pds5bQ4VA53 Gm7856-201ENSMUST00000117514 1493 ntBASIC30.61■■■□□ 2.49
Pds5bQ4VA53 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Pds5bQ4VA53 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Pds5bQ4VA53 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC30.61■■■□□ 2.49
Pds5bQ4VA53 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Pds5bQ4VA53 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC30.61■■■□□ 2.49
Pds5bQ4VA53 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
Pds5bQ4VA53 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Pds5bQ4VA53 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Pds5bQ4VA53 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC30.61■■■□□ 2.49
Pds5bQ4VA53 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
Pds5bQ4VA53 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Pds5bQ4VA53 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Pds5bQ4VA53 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC30.6■■■□□ 2.49
Pds5bQ4VA53 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Pds5bQ4VA53 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC30.6■■■□□ 2.49
Pds5bQ4VA53 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Pds5bQ4VA53 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Pds5bQ4VA53 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Pds5bQ4VA53 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
Pds5bQ4VA53 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Pds5bQ4VA53 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC30.6■■■□□ 2.49
Pds5bQ4VA53 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Pds5bQ4VA53 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Pds5bQ4VA53 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Pds5bQ4VA53 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Pds5bQ4VA53 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC30.59■■■□□ 2.49
Pds5bQ4VA53 Gm43006-201ENSMUST00000197702 1602 ntBASIC30.59■■■□□ 2.49
Pds5bQ4VA53 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
Pds5bQ4VA53 Gm24513-201ENSMUST00000174964 138 ntBASIC30.59■■■□□ 2.49
Pds5bQ4VA53 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC30.59■■■□□ 2.49
Pds5bQ4VA53 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC30.59■■■□□ 2.49
Pds5bQ4VA53 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
Pds5bQ4VA53 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms