Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Ckap2Q3V1H1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ckap2Q3V1H1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ckap2Q3V1H1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.11■□□□□ 0.81
Ckap2Q3V1H1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ckap2Q3V1H1 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.11■□□□□ 0.81
Ckap2Q3V1H1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.11■□□□□ 0.81
Ckap2Q3V1H1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ckap2Q3V1H1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ckap2Q3V1H1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ckap2Q3V1H1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ckap2Q3V1H1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ckap2Q3V1H1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ckap2Q3V1H1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ckap2Q3V1H1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ckap2Q3V1H1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ckap2Q3V1H1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ckap2Q3V1H1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ckap2Q3V1H1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.1■□□□□ 0.81
Ckap2Q3V1H1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.1■□□□□ 0.81
Ckap2Q3V1H1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.1■□□□□ 0.81
Ckap2Q3V1H1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.1■□□□□ 0.81
Ckap2Q3V1H1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Ckap2Q3V1H1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Ckap2Q3V1H1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ckap2Q3V1H1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Ckap2Q3V1H1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ckap2Q3V1H1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ckap2Q3V1H1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ckap2Q3V1H1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ckap2Q3V1H1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ckap2Q3V1H1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ckap2Q3V1H1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.09■□□□□ 0.81
Ckap2Q3V1H1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ckap2Q3V1H1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.09■□□□□ 0.81
Ckap2Q3V1H1 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.09■□□□□ 0.81
Ckap2Q3V1H1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ckap2Q3V1H1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ckap2Q3V1H1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ckap2Q3V1H1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ckap2Q3V1H1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ckap2Q3V1H1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ckap2Q3V1H1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ckap2Q3V1H1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ckap2Q3V1H1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ckap2Q3V1H1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ckap2Q3V1H1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ckap2Q3V1H1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Ckap2Q3V1H1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ckap2Q3V1H1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.08■□□□□ 0.81
Ckap2Q3V1H1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ckap2Q3V1H1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Ckap2Q3V1H1 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.08■□□□□ 0.81
Ckap2Q3V1H1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Ckap2Q3V1H1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.08■□□□□ 0.81
Ckap2Q3V1H1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ckap2Q3V1H1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ckap2Q3V1H1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ckap2Q3V1H1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ckap2Q3V1H1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ckap2Q3V1H1 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.08■□□□□ 0.8
Ckap2Q3V1H1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ckap2Q3V1H1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ckap2Q3V1H1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
Ckap2Q3V1H1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ckap2Q3V1H1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Ckap2Q3V1H1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ckap2Q3V1H1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.06■□□□□ 0.8
Ckap2Q3V1H1 Gm21814-202ENSMUST00000203277 873 ntBASIC20.06■□□□□ 0.8
Ckap2Q3V1H1 Odf3b-204ENSMUST00000227834 930 ntBASIC20.06■□□□□ 0.8
Ckap2Q3V1H1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ckap2Q3V1H1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ckap2Q3V1H1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.05■□□□□ 0.8
Ckap2Q3V1H1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Ckap2Q3V1H1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ckap2Q3V1H1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Ckap2Q3V1H1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ckap2Q3V1H1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Ckap2Q3V1H1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.05■□□□□ 0.8
Ckap2Q3V1H1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.05■□□□□ 0.8
Ckap2Q3V1H1 Timm23-208ENSMUST00000226683 750 ntBASIC20.05■□□□□ 0.8
Ckap2Q3V1H1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms