Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm10653-202ENSMUST00000139570 835 ntBASIC18.1■□□□□ 0.49
Trim80Q3V061 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Trim80Q3V061 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim80Q3V061 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim80Q3V061 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim80Q3V061 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim80Q3V061 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim80Q3V061 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim80Q3V061 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.09■□□□□ 0.49
Trim80Q3V061 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim80Q3V061 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim80Q3V061 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim80Q3V061 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Trim80Q3V061 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim80Q3V061 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.09■□□□□ 0.49
Trim80Q3V061 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim80Q3V061 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim80Q3V061 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim80Q3V061 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim80Q3V061 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.09■□□□□ 0.49
Trim80Q3V061 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim80Q3V061 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim80Q3V061 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim80Q3V061 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim80Q3V061 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim80Q3V061 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim80Q3V061 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.08■□□□□ 0.48
Trim80Q3V061 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.08■□□□□ 0.48
Trim80Q3V061 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim80Q3V061 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim80Q3V061 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim80Q3V061 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim80Q3V061 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Trim80Q3V061 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trim80Q3V061 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Trim80Q3V061 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Trim80Q3V061 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim80Q3V061 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim80Q3V061 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trim80Q3V061 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim80Q3V061 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trim80Q3V061 Gm13146-201ENSMUST00000118508 780 ntBASIC18.07■□□□□ 0.48
Trim80Q3V061 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.07■□□□□ 0.48
Trim80Q3V061 Gm22240-201ENSMUST00000175225 82 ntBASIC18.07■□□□□ 0.48
Trim80Q3V061 Gm8520-201ENSMUST00000186517 868 ntBASIC18.07■□□□□ 0.48
Trim80Q3V061 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim80Q3V061 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim80Q3V061 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.07■□□□□ 0.48
Trim80Q3V061 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim80Q3V061 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim80Q3V061 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim80Q3V061 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim80Q3V061 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim80Q3V061 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim80Q3V061 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim80Q3V061 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim80Q3V061 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim80Q3V061 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.06■□□□□ 0.48
Trim80Q3V061 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Trim80Q3V061 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.06■□□□□ 0.48
Trim80Q3V061 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trim80Q3V061 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trim80Q3V061 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim80Q3V061 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim80Q3V061 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim80Q3V061 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim80Q3V061 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim80Q3V061 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim80Q3V061 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim80Q3V061 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.05■□□□□ 0.48
Trim80Q3V061 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim80Q3V061 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trim80Q3V061 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim80Q3V061 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim80Q3V061 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim80Q3V061 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim80Q3V061 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim80Q3V061 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim80Q3V061 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim80Q3V061 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim80Q3V061 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim80Q3V061 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim80Q3V061 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim80Q3V061 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.04■□□□□ 0.48
Trim80Q3V061 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim80Q3V061 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim80Q3V061 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim80Q3V061 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim80Q3V061 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim80Q3V061 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim80Q3V061 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim80Q3V061 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trim80Q3V061 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Trim80Q3V061 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.04■□□□□ 0.48
Trim80Q3V061 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim80Q3V061 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim80Q3V061 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim80Q3V061 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trim80Q3V061 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim80Q3V061 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms