Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn4Q3UWL8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn4Q3UWL8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn4Q3UWL8 Gm6420-201ENSMUST00000193885 723 ntBASIC17.18■□□□□ 0.34
Pfdn4Q3UWL8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.18■□□□□ 0.34
Pfdn4Q3UWL8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn4Q3UWL8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pfdn4Q3UWL8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn4Q3UWL8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn4Q3UWL8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn4Q3UWL8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn4Q3UWL8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn4Q3UWL8 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.17■□□□□ 0.34
Pfdn4Q3UWL8 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.17■□□□□ 0.34
Pfdn4Q3UWL8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn4Q3UWL8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn4Q3UWL8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn4Q3UWL8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pfdn4Q3UWL8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pfdn4Q3UWL8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn4Q3UWL8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.17■□□□□ 0.34
Pfdn4Q3UWL8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn4Q3UWL8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn4Q3UWL8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn4Q3UWL8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn4Q3UWL8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pfdn4Q3UWL8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn4Q3UWL8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn4Q3UWL8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 Nespas-201ENSMUST00000143738 1083 ntBASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 Gm42642-201ENSMUST00000200683 355 ntBASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn4Q3UWL8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn4Q3UWL8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pfdn4Q3UWL8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pfdn4Q3UWL8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn4Q3UWL8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Pfdn4Q3UWL8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn4Q3UWL8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn4Q3UWL8 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.14■□□□□ 0.33
Pfdn4Q3UWL8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn4Q3UWL8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn4Q3UWL8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn4Q3UWL8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn4Q3UWL8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.14■□□□□ 0.33
Pfdn4Q3UWL8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn4Q3UWL8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn4Q3UWL8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn4Q3UWL8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn4Q3UWL8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn4Q3UWL8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn4Q3UWL8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn4Q3UWL8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn4Q3UWL8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn4Q3UWL8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn4Q3UWL8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn4Q3UWL8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn4Q3UWL8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pfdn4Q3UWL8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn4Q3UWL8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn4Q3UWL8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
Pfdn4Q3UWL8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms