Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm29609Q3UU56 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm29609Q3UU56 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm29609Q3UU56 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm29609Q3UU56 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Gm29609Q3UU56 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm29609Q3UU56 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.38■□□□□ 0.53
Gm29609Q3UU56 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm29609Q3UU56 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm29609Q3UU56 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.37■□□□□ 0.53
Gm29609Q3UU56 Gm11539-201ENSMUST00000119837 557 ntBASIC18.37■□□□□ 0.53
Gm29609Q3UU56 Gm13436-201ENSMUST00000120418 567 ntBASIC18.37■□□□□ 0.53
Gm29609Q3UU56 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm29609Q3UU56 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.37■□□□□ 0.53
Gm29609Q3UU56 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Gm29609Q3UU56 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
Gm29609Q3UU56 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm29609Q3UU56 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm29609Q3UU56 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm29609Q3UU56 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm29609Q3UU56 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm29609Q3UU56 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm29609Q3UU56 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm29609Q3UU56 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm29609Q3UU56 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm29609Q3UU56 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm29609Q3UU56 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm29609Q3UU56 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm29609Q3UU56 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm29609Q3UU56 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm29609Q3UU56 Gm17971-201ENSMUST00000190239 806 ntBASIC18.36■□□□□ 0.53
Gm29609Q3UU56 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm29609Q3UU56 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.36■□□□□ 0.53
Gm29609Q3UU56 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm29609Q3UU56 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm29609Q3UU56 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm29609Q3UU56 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Gm29609Q3UU56 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.36■□□□□ 0.53
Gm29609Q3UU56 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm29609Q3UU56 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Gm29609Q3UU56 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm29609Q3UU56 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm29609Q3UU56 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm29609Q3UU56 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm29609Q3UU56 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm29609Q3UU56 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm29609Q3UU56 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm29609Q3UU56 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm29609Q3UU56 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm29609Q3UU56 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.34■□□□□ 0.53
Gm29609Q3UU56 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Gm29609Q3UU56 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm29609Q3UU56 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm29609Q3UU56 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm29609Q3UU56 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm29609Q3UU56 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm29609Q3UU56 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm29609Q3UU56 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Gm29609Q3UU56 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Gm29609Q3UU56 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm29609Q3UU56 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm29609Q3UU56 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.33■□□□□ 0.53
Gm29609Q3UU56 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm29609Q3UU56 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm29609Q3UU56 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm29609Q3UU56 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Gm29609Q3UU56 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm29609Q3UU56 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Gm29609Q3UU56 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Gm29609Q3UU56 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm29609Q3UU56 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm29609Q3UU56 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm29609Q3UU56 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gm29609Q3UU56 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm29609Q3UU56 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm29609Q3UU56 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gm29609Q3UU56 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm29609Q3UU56 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm29609Q3UU56 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.32■□□□□ 0.52
Gm29609Q3UU56 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm29609Q3UU56 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms