Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
Arhgef40Q3UPH7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Arhgef40Q3UPH7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC25.89■■□□□ 1.73
Arhgef40Q3UPH7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC25.89■■□□□ 1.73
Arhgef40Q3UPH7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC25.88■■□□□ 1.73
Arhgef40Q3UPH7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Arhgef40Q3UPH7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC25.88■■□□□ 1.73
Arhgef40Q3UPH7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
Arhgef40Q3UPH7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Arhgef40Q3UPH7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Arhgef40Q3UPH7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Arhgef40Q3UPH7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC25.87■■□□□ 1.73
Arhgef40Q3UPH7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC25.87■■□□□ 1.73
Arhgef40Q3UPH7 Otx2os1-206ENSMUST00000228153 787 ntBASIC25.87■■□□□ 1.73
Arhgef40Q3UPH7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Arhgef40Q3UPH7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Arhgef40Q3UPH7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Arhgef40Q3UPH7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Arhgef40Q3UPH7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Arhgef40Q3UPH7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Arhgef40Q3UPH7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Arhgef40Q3UPH7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
Arhgef40Q3UPH7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Arhgef40Q3UPH7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Arhgef40Q3UPH7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Arhgef40Q3UPH7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Arhgef40Q3UPH7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Arhgef40Q3UPH7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Arhgef40Q3UPH7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Arhgef40Q3UPH7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Arhgef40Q3UPH7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC25.85■■□□□ 1.73
Arhgef40Q3UPH7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Arhgef40Q3UPH7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC25.85■■□□□ 1.73
Arhgef40Q3UPH7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
Arhgef40Q3UPH7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Arhgef40Q3UPH7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Arhgef40Q3UPH7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Arhgef40Q3UPH7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Arhgef40Q3UPH7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Arhgef40Q3UPH7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Arhgef40Q3UPH7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Arhgef40Q3UPH7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Arhgef40Q3UPH7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
Arhgef40Q3UPH7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Arhgef40Q3UPH7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC25.84■■□□□ 1.73
Arhgef40Q3UPH7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC25.84■■□□□ 1.73
Arhgef40Q3UPH7 Mzt1-203ENSMUST00000227948 952 ntBASIC25.84■■□□□ 1.73
Arhgef40Q3UPH7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC25.84■■□□□ 1.73
Arhgef40Q3UPH7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC25.84■■□□□ 1.73
Arhgef40Q3UPH7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Arhgef40Q3UPH7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Arhgef40Q3UPH7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC25.84■■□□□ 1.73
Arhgef40Q3UPH7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Arhgef40Q3UPH7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Arhgef40Q3UPH7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Arhgef40Q3UPH7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Arhgef40Q3UPH7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC25.83■■□□□ 1.73
Arhgef40Q3UPH7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Arhgef40Q3UPH7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Arhgef40Q3UPH7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
Arhgef40Q3UPH7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC25.83■■□□□ 1.72
Arhgef40Q3UPH7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
Arhgef40Q3UPH7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC25.83■■□□□ 1.72
Arhgef40Q3UPH7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
Arhgef40Q3UPH7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Arhgef40Q3UPH7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC25.82■■□□□ 1.72
Arhgef40Q3UPH7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Arhgef40Q3UPH7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Arhgef40Q3UPH7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Arhgef40Q3UPH7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Arhgef40Q3UPH7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Arhgef40Q3UPH7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Arhgef40Q3UPH7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Arhgef40Q3UPH7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Arhgef40Q3UPH7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Arhgef40Q3UPH7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Arhgef40Q3UPH7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Arhgef40Q3UPH7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Arhgef40Q3UPH7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Arhgef40Q3UPH7 Gm24589-201ENSMUST00000116692 94 ntBASIC25.81■■□□□ 1.72
Arhgef40Q3UPH7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Arhgef40Q3UPH7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Arhgef40Q3UPH7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Arhgef40Q3UPH7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Arhgef40Q3UPH7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Arhgef40Q3UPH7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC25.81■■□□□ 1.72
Arhgef40Q3UPH7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Arhgef40Q3UPH7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Arhgef40Q3UPH7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Arhgef40Q3UPH7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
Arhgef40Q3UPH7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Arhgef40Q3UPH7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Arhgef40Q3UPH7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Arhgef40Q3UPH7 Mir3081-201ENSMUST00000175305 84 ntBASIC25.8■■□□□ 1.72
Arhgef40Q3UPH7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC25.8■■□□□ 1.72
Arhgef40Q3UPH7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC25.8■■□□□ 1.72
Arhgef40Q3UPH7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Arhgef40Q3UPH7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Arhgef40Q3UPH7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Arhgef40Q3UPH7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 133 ms