Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Naf1Q3UMQ8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Naf1Q3UMQ8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Naf1Q3UMQ8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Naf1Q3UMQ8 Grk6-206ENSMUST00000224995 2971 ntBASIC17.82■□□□□ 0.44
Naf1Q3UMQ8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Naf1Q3UMQ8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.82■□□□□ 0.44
Naf1Q3UMQ8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Naf1Q3UMQ8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Naf1Q3UMQ8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Naf1Q3UMQ8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Naf1Q3UMQ8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Naf1Q3UMQ8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Naf1Q3UMQ8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Naf1Q3UMQ8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Naf1Q3UMQ8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Naf1Q3UMQ8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Naf1Q3UMQ8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Naf1Q3UMQ8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Naf1Q3UMQ8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Naf1Q3UMQ8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.79■□□□□ 0.44
Naf1Q3UMQ8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Naf1Q3UMQ8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Naf1Q3UMQ8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Naf1Q3UMQ8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Naf1Q3UMQ8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Naf1Q3UMQ8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Naf1Q3UMQ8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Naf1Q3UMQ8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Naf1Q3UMQ8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Naf1Q3UMQ8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.78■□□□□ 0.44
Naf1Q3UMQ8 Gm24841-201ENSMUST00000158676 357 ntBASIC17.78■□□□□ 0.44
Naf1Q3UMQ8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.78■□□□□ 0.44
Naf1Q3UMQ8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Naf1Q3UMQ8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Naf1Q3UMQ8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Naf1Q3UMQ8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.78■□□□□ 0.44
Naf1Q3UMQ8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.78■□□□□ 0.44
Naf1Q3UMQ8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Naf1Q3UMQ8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Naf1Q3UMQ8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Naf1Q3UMQ8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Naf1Q3UMQ8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.77■□□□□ 0.44
Naf1Q3UMQ8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.77■□□□□ 0.44
Naf1Q3UMQ8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
Naf1Q3UMQ8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Naf1Q3UMQ8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Naf1Q3UMQ8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Naf1Q3UMQ8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Naf1Q3UMQ8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Naf1Q3UMQ8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Naf1Q3UMQ8 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.77■□□□□ 0.44
Naf1Q3UMQ8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.77■□□□□ 0.44
Naf1Q3UMQ8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Naf1Q3UMQ8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Naf1Q3UMQ8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Naf1Q3UMQ8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.77■□□□□ 0.44
Naf1Q3UMQ8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Naf1Q3UMQ8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Naf1Q3UMQ8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Naf1Q3UMQ8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Naf1Q3UMQ8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms