Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Snx27Q3UHD6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Snx27Q3UHD6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.95■□□□□ 0.62
Snx27Q3UHD6 Il3ra-202ENSMUST00000223589 738 ntBASIC18.95■□□□□ 0.62
Snx27Q3UHD6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx27Q3UHD6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Snx27Q3UHD6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx27Q3UHD6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx27Q3UHD6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx27Q3UHD6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx27Q3UHD6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx27Q3UHD6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx27Q3UHD6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Snx27Q3UHD6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx27Q3UHD6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Snx27Q3UHD6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.94■□□□□ 0.62
Snx27Q3UHD6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx27Q3UHD6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx27Q3UHD6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Snx27Q3UHD6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Snx27Q3UHD6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Snx27Q3UHD6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx27Q3UHD6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snx27Q3UHD6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snx27Q3UHD6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snx27Q3UHD6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snx27Q3UHD6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snx27Q3UHD6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snx27Q3UHD6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Snx27Q3UHD6 Gm16061-201ENSMUST00000122167 857 ntBASIC18.93■□□□□ 0.62
Snx27Q3UHD6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Snx27Q3UHD6 Gm6659-201ENSMUST00000174752 547 ntBASIC18.93■□□□□ 0.62
Snx27Q3UHD6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snx27Q3UHD6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Snx27Q3UHD6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Snx27Q3UHD6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snx27Q3UHD6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snx27Q3UHD6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.92■□□□□ 0.62
Snx27Q3UHD6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snx27Q3UHD6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Snx27Q3UHD6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snx27Q3UHD6 Gm17661-201ENSMUST00000170317 270 ntBASIC18.92■□□□□ 0.62
Snx27Q3UHD6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.92■□□□□ 0.62
Snx27Q3UHD6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snx27Q3UHD6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.92■□□□□ 0.62
Snx27Q3UHD6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snx27Q3UHD6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snx27Q3UHD6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snx27Q3UHD6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Snx27Q3UHD6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Gm7370-201ENSMUST00000219471 767 ntBASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.91■□□□□ 0.62
Snx27Q3UHD6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Snx27Q3UHD6 Grk6-206ENSMUST00000224995 2971 ntBASIC18.9■□□□□ 0.62
Snx27Q3UHD6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snx27Q3UHD6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snx27Q3UHD6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Snx27Q3UHD6 Gm10013-201ENSMUST00000106074 672 ntBASIC18.9■□□□□ 0.62
Snx27Q3UHD6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snx27Q3UHD6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Snx27Q3UHD6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Snx27Q3UHD6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snx27Q3UHD6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Snx27Q3UHD6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.9■□□□□ 0.62
Snx27Q3UHD6 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.9■□□□□ 0.62
Snx27Q3UHD6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.9■□□□□ 0.62
Snx27Q3UHD6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snx27Q3UHD6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snx27Q3UHD6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snx27Q3UHD6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snx27Q3UHD6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snx27Q3UHD6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Snx27Q3UHD6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Snx27Q3UHD6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snx27Q3UHD6 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.89■□□□□ 0.61
Snx27Q3UHD6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Snx27Q3UHD6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Snx27Q3UHD6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snx27Q3UHD6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snx27Q3UHD6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Snx27Q3UHD6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms