Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.83■□□□□ 0.93
Col5a2Q3U962 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Col5a2Q3U962 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col5a2Q3U962 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col5a2Q3U962 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Col5a2Q3U962 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col5a2Q3U962 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col5a2Q3U962 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col5a2Q3U962 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Col5a2Q3U962 Gm18733-201ENSMUST00000173950 856 ntBASIC20.82■□□□□ 0.92
Col5a2Q3U962 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.82■□□□□ 0.92
Col5a2Q3U962 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col5a2Q3U962 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.82■□□□□ 0.92
Col5a2Q3U962 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Col5a2Q3U962 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col5a2Q3U962 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col5a2Q3U962 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.82■□□□□ 0.92
Col5a2Q3U962 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col5a2Q3U962 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col5a2Q3U962 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col5a2Q3U962 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col5a2Q3U962 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col5a2Q3U962 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Col5a2Q3U962 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col5a2Q3U962 Gm37935-201ENSMUST00000192012 982 ntBASIC20.81■□□□□ 0.92
Col5a2Q3U962 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col5a2Q3U962 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.81■□□□□ 0.92
Col5a2Q3U962 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col5a2Q3U962 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.81■□□□□ 0.92
Col5a2Q3U962 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Col5a2Q3U962 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col5a2Q3U962 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col5a2Q3U962 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.81■□□□□ 0.92
Col5a2Q3U962 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.81■□□□□ 0.92
Col5a2Q3U962 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col5a2Q3U962 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col5a2Q3U962 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col5a2Q3U962 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Col5a2Q3U962 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Col5a2Q3U962 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col5a2Q3U962 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col5a2Q3U962 Gm15372-201ENSMUST00000120729 834 ntBASIC20.8■□□□□ 0.92
Col5a2Q3U962 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.8■□□□□ 0.92
Col5a2Q3U962 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.8■□□□□ 0.92
Col5a2Q3U962 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Col5a2Q3U962 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Col5a2Q3U962 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col5a2Q3U962 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Col5a2Q3U962 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col5a2Q3U962 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col5a2Q3U962 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col5a2Q3U962 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col5a2Q3U962 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.79■□□□□ 0.92
Col5a2Q3U962 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.79■□□□□ 0.92
Col5a2Q3U962 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.79■□□□□ 0.92
Col5a2Q3U962 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col5a2Q3U962 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col5a2Q3U962 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col5a2Q3U962 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col5a2Q3U962 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col5a2Q3U962 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col5a2Q3U962 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col5a2Q3U962 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col5a2Q3U962 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col5a2Q3U962 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col5a2Q3U962 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.78■□□□□ 0.92
Col5a2Q3U962 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col5a2Q3U962 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col5a2Q3U962 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.78■□□□□ 0.92
Col5a2Q3U962 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col5a2Q3U962 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col5a2Q3U962 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col5a2Q3U962 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.77■□□□□ 0.92
Col5a2Q3U962 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.77■□□□□ 0.92
Col5a2Q3U962 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col5a2Q3U962 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col5a2Q3U962 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.77■□□□□ 0.92
Col5a2Q3U962 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Col5a2Q3U962 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col5a2Q3U962 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col5a2Q3U962 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Col5a2Q3U962 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col5a2Q3U962 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col5a2Q3U962 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col5a2Q3U962 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
Col5a2Q3U962 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.76■□□□□ 0.91
Col5a2Q3U962 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col5a2Q3U962 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Col5a2Q3U962 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.76■□□□□ 0.91
Col5a2Q3U962 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.76■□□□□ 0.91
Col5a2Q3U962 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col5a2Q3U962 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col5a2Q3U962 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col5a2Q3U962 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col5a2Q3U962 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col5a2Q3U962 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col5a2Q3U962 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col5a2Q3U962 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col5a2Q3U962 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col5a2Q3U962 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms