Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf180Q3U827 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf180Q3U827 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf180Q3U827 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf180Q3U827 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.71■□□□□ 0.91
Rnf180Q3U827 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rnf180Q3U827 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf180Q3U827 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf180Q3U827 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf180Q3U827 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rnf180Q3U827 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf180Q3U827 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf180Q3U827 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf180Q3U827 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.7■□□□□ 0.9
Rnf180Q3U827 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf180Q3U827 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf180Q3U827 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf180Q3U827 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf180Q3U827 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf180Q3U827 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf180Q3U827 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf180Q3U827 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
Rnf180Q3U827 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Rnf180Q3U827 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf180Q3U827 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf180Q3U827 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf180Q3U827 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.69■□□□□ 0.9
Rnf180Q3U827 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf180Q3U827 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf180Q3U827 Gm5648-201ENSMUST00000122244 1587 ntBASIC20.69■□□□□ 0.9
Rnf180Q3U827 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf180Q3U827 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf180Q3U827 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC20.69■□□□□ 0.9
Rnf180Q3U827 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.69■□□□□ 0.9
Rnf180Q3U827 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC20.69■□□□□ 0.9
Rnf180Q3U827 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf180Q3U827 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rnf180Q3U827 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf180Q3U827 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf180Q3U827 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf180Q3U827 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.69■□□□□ 0.9
Rnf180Q3U827 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf180Q3U827 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf180Q3U827 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf180Q3U827 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.68■□□□□ 0.9
Rnf180Q3U827 Gm25911-201ENSMUST00000157621 56 ntBASIC20.68■□□□□ 0.9
Rnf180Q3U827 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rnf180Q3U827 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.68■□□□□ 0.9
Rnf180Q3U827 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf180Q3U827 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Rnf180Q3U827 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf180Q3U827 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rnf180Q3U827 Gm15590-201ENSMUST00000078419 552 ntBASIC20.68■□□□□ 0.9
Rnf180Q3U827 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf180Q3U827 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf180Q3U827 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf180Q3U827 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf180Q3U827 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf180Q3U827 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf180Q3U827 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Gm13312-201ENSMUST00000119631 718 ntBASIC20.67■□□□□ 0.9
Rnf180Q3U827 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Gm27867-201ENSMUST00000184778 125 ntBASIC20.67■□□□□ 0.9
Rnf180Q3U827 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Rnf180Q3U827 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf180Q3U827 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf180Q3U827 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf180Q3U827 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf180Q3U827 Gm5745-201ENSMUST00000183748 313 ntBASIC20.66■□□□□ 0.9
Rnf180Q3U827 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf180Q3U827 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC20.66■□□□□ 0.9
Rnf180Q3U827 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC20.66■□□□□ 0.9
Rnf180Q3U827 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf180Q3U827 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf180Q3U827 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Rnf180Q3U827 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf180Q3U827 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf180Q3U827 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf180Q3U827 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf180Q3U827 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf180Q3U827 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
Rnf180Q3U827 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf180Q3U827 Gm11025-201ENSMUST00000140773 466 ntBASIC20.65■□□□□ 0.9
Rnf180Q3U827 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms