Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shcbp1lQ3TTP0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shcbp1lQ3TTP0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Shcbp1lQ3TTP0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shcbp1lQ3TTP0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shcbp1lQ3TTP0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shcbp1lQ3TTP0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shcbp1lQ3TTP0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shcbp1lQ3TTP0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shcbp1lQ3TTP0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.67■□□□□ 0.42
Shcbp1lQ3TTP0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.67■□□□□ 0.42
Shcbp1lQ3TTP0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Shcbp1lQ3TTP0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Shcbp1lQ3TTP0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.67■□□□□ 0.42
Shcbp1lQ3TTP0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shcbp1lQ3TTP0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shcbp1lQ3TTP0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shcbp1lQ3TTP0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shcbp1lQ3TTP0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shcbp1lQ3TTP0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Gm30025-201ENSMUST00000218555 728 ntBASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.66■□□□□ 0.42
Shcbp1lQ3TTP0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shcbp1lQ3TTP0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shcbp1lQ3TTP0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Shcbp1lQ3TTP0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shcbp1lQ3TTP0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shcbp1lQ3TTP0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shcbp1lQ3TTP0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shcbp1lQ3TTP0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Shcbp1lQ3TTP0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shcbp1lQ3TTP0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.65■□□□□ 0.42
Shcbp1lQ3TTP0 Gm3375-201ENSMUST00000203929 796 ntBASIC17.65■□□□□ 0.42
Shcbp1lQ3TTP0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shcbp1lQ3TTP0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shcbp1lQ3TTP0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shcbp1lQ3TTP0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Shcbp1lQ3TTP0 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.64■□□□□ 0.42
Shcbp1lQ3TTP0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Shcbp1lQ3TTP0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shcbp1lQ3TTP0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shcbp1lQ3TTP0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shcbp1lQ3TTP0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shcbp1lQ3TTP0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Shcbp1lQ3TTP0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shcbp1lQ3TTP0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.64■□□□□ 0.41
Shcbp1lQ3TTP0 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.64■□□□□ 0.41
Shcbp1lQ3TTP0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shcbp1lQ3TTP0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shcbp1lQ3TTP0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shcbp1lQ3TTP0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shcbp1lQ3TTP0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Shcbp1lQ3TTP0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shcbp1lQ3TTP0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shcbp1lQ3TTP0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Shcbp1lQ3TTP0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Shcbp1lQ3TTP0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Shcbp1lQ3TTP0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Shcbp1lQ3TTP0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shcbp1lQ3TTP0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shcbp1lQ3TTP0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Shcbp1lQ3TTP0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shcbp1lQ3TTP0 Gm10517-202ENSMUST00000192970 758 ntBASIC17.63■□□□□ 0.41
Shcbp1lQ3TTP0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.63■□□□□ 0.41
Shcbp1lQ3TTP0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shcbp1lQ3TTP0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shcbp1lQ3TTP0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shcbp1lQ3TTP0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shcbp1lQ3TTP0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Shcbp1lQ3TTP0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shcbp1lQ3TTP0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shcbp1lQ3TTP0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shcbp1lQ3TTP0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms