Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ctdnep1Q3TP92 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ctdnep1Q3TP92 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ctdnep1Q3TP92 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ctdnep1Q3TP92 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ctdnep1Q3TP92 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ctdnep1Q3TP92 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.27■□□□□ 0.84
Ctdnep1Q3TP92 Gm10698-201ENSMUST00000182663 604 ntBASIC20.27■□□□□ 0.84
Ctdnep1Q3TP92 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ctdnep1Q3TP92 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ctdnep1Q3TP92 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ctdnep1Q3TP92 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ctdnep1Q3TP92 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ctdnep1Q3TP92 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ctdnep1Q3TP92 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ctdnep1Q3TP92 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ctdnep1Q3TP92 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ctdnep1Q3TP92 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ctdnep1Q3TP92 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.26■□□□□ 0.83
Ctdnep1Q3TP92 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ctdnep1Q3TP92 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ctdnep1Q3TP92 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ctdnep1Q3TP92 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ctdnep1Q3TP92 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ctdnep1Q3TP92 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Ctdnep1Q3TP92 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ctdnep1Q3TP92 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.26■□□□□ 0.83
Ctdnep1Q3TP92 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ctdnep1Q3TP92 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ctdnep1Q3TP92 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdnep1Q3TP92 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdnep1Q3TP92 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdnep1Q3TP92 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdnep1Q3TP92 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdnep1Q3TP92 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Ctdnep1Q3TP92 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.25■□□□□ 0.83
Ctdnep1Q3TP92 Gm18666-201ENSMUST00000190039 958 ntBASIC20.25■□□□□ 0.83
Ctdnep1Q3TP92 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdnep1Q3TP92 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdnep1Q3TP92 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdnep1Q3TP92 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdnep1Q3TP92 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdnep1Q3TP92 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ctdnep1Q3TP92 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdnep1Q3TP92 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdnep1Q3TP92 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdnep1Q3TP92 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Ctdnep1Q3TP92 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ctdnep1Q3TP92 Gm43183-201ENSMUST00000200632 547 ntBASIC20.24■□□□□ 0.83
Ctdnep1Q3TP92 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ctdnep1Q3TP92 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ctdnep1Q3TP92 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ctdnep1Q3TP92 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ctdnep1Q3TP92 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ctdnep1Q3TP92 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.24■□□□□ 0.83
Ctdnep1Q3TP92 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ctdnep1Q3TP92 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ctdnep1Q3TP92 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ctdnep1Q3TP92 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ctdnep1Q3TP92 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ctdnep1Q3TP92 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ctdnep1Q3TP92 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ctdnep1Q3TP92 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Ctdnep1Q3TP92 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.23■□□□□ 0.83
Ctdnep1Q3TP92 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ctdnep1Q3TP92 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ctdnep1Q3TP92 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ctdnep1Q3TP92 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ctdnep1Q3TP92 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.23■□□□□ 0.83
Ctdnep1Q3TP92 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ctdnep1Q3TP92 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.22■□□□□ 0.83
Ctdnep1Q3TP92 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.22■□□□□ 0.83
Ctdnep1Q3TP92 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ctdnep1Q3TP92 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ctdnep1Q3TP92 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ctdnep1Q3TP92 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ctdnep1Q3TP92 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.22■□□□□ 0.83
Ctdnep1Q3TP92 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ctdnep1Q3TP92 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ctdnep1Q3TP92 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ctdnep1Q3TP92 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ctdnep1Q3TP92 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ctdnep1Q3TP92 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.22■□□□□ 0.83
Ctdnep1Q3TP92 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ctdnep1Q3TP92 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ctdnep1Q3TP92 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ctdnep1Q3TP92 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Ctdnep1Q3TP92 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ctdnep1Q3TP92 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ctdnep1Q3TP92 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.21■□□□□ 0.83
Ctdnep1Q3TP92 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ctdnep1Q3TP92 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ctdnep1Q3TP92 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ctdnep1Q3TP92 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ctdnep1Q3TP92 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ctdnep1Q3TP92 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ctdnep1Q3TP92 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.21■□□□□ 0.83
Ctdnep1Q3TP92 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ctdnep1Q3TP92 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ctdnep1Q3TP92 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms