Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nhej1Q3KNJ2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.73■□□□□ 0.59
Nhej1Q3KNJ2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nhej1Q3KNJ2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Gm2399-201ENSMUST00000104944 225 ntBASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Gm7290-201ENSMUST00000104990 617 ntBASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Gm12918-201ENSMUST00000120234 636 ntBASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Gm15710-201ENSMUST00000121821 636 ntBASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Gm5075-201ENSMUST00000196916 622 ntBASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nhej1Q3KNJ2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 Gm10418-201ENSMUST00000100943 576 ntBASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 Mir8112-201ENSMUST00000184382 131 ntBASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 Zfp783-201ENSMUST00000095946 670 ntBASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.71■□□□□ 0.59
Nhej1Q3KNJ2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Nhej1Q3KNJ2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nhej1Q3KNJ2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
Nhej1Q3KNJ2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.7■□□□□ 0.58
Nhej1Q3KNJ2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nhej1Q3KNJ2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nhej1Q3KNJ2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nhej1Q3KNJ2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nhej1Q3KNJ2 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.7■□□□□ 0.58
Nhej1Q3KNJ2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nhej1Q3KNJ2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nhej1Q3KNJ2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nhej1Q3KNJ2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Nhej1Q3KNJ2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.69■□□□□ 0.58
Nhej1Q3KNJ2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nhej1Q3KNJ2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nhej1Q3KNJ2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nhej1Q3KNJ2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nhej1Q3KNJ2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.69■□□□□ 0.58
Nhej1Q3KNJ2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nhej1Q3KNJ2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nhej1Q3KNJ2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nhej1Q3KNJ2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Nhej1Q3KNJ2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nhej1Q3KNJ2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nhej1Q3KNJ2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.69■□□□□ 0.58
Nhej1Q3KNJ2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nhej1Q3KNJ2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nhej1Q3KNJ2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Gm6211-202ENSMUST00000167849 925 ntBASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Nhej1Q3KNJ2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.67■□□□□ 0.58
Nhej1Q3KNJ2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nhej1Q3KNJ2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nhej1Q3KNJ2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nhej1Q3KNJ2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms