Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Chrna5Q2MKA5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chrna5Q2MKA5 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chrna5Q2MKA5 Fst-202ENSMUST00000223640 2612 ntBASIC20.89■□□□□ 0.93
Chrna5Q2MKA5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.89■□□□□ 0.93
Chrna5Q2MKA5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chrna5Q2MKA5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.89■□□□□ 0.93
Chrna5Q2MKA5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chrna5Q2MKA5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Chrna5Q2MKA5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chrna5Q2MKA5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chrna5Q2MKA5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chrna5Q2MKA5 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chrna5Q2MKA5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Chrna5Q2MKA5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna5Q2MKA5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna5Q2MKA5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Chrna5Q2MKA5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.88■□□□□ 0.93
Chrna5Q2MKA5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna5Q2MKA5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna5Q2MKA5 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.88■□□□□ 0.93
Chrna5Q2MKA5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna5Q2MKA5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna5Q2MKA5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
Chrna5Q2MKA5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna5Q2MKA5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna5Q2MKA5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna5Q2MKA5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna5Q2MKA5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna5Q2MKA5 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.86■□□□□ 0.93
Chrna5Q2MKA5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna5Q2MKA5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Chrna5Q2MKA5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna5Q2MKA5 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna5Q2MKA5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna5Q2MKA5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.86■□□□□ 0.93
Chrna5Q2MKA5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna5Q2MKA5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna5Q2MKA5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna5Q2MKA5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna5Q2MKA5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna5Q2MKA5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna5Q2MKA5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.85■□□□□ 0.93
Chrna5Q2MKA5 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Chrna5Q2MKA5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna5Q2MKA5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna5Q2MKA5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna5Q2MKA5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna5Q2MKA5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna5Q2MKA5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.84■□□□□ 0.93
Chrna5Q2MKA5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna5Q2MKA5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna5Q2MKA5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Chrna5Q2MKA5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna5Q2MKA5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna5Q2MKA5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Chrna5Q2MKA5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Chrna5Q2MKA5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC20.83■□□□□ 0.93
Chrna5Q2MKA5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna5Q2MKA5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna5Q2MKA5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna5Q2MKA5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Chrna5Q2MKA5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.83■□□□□ 0.93
Chrna5Q2MKA5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.93
Chrna5Q2MKA5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chrna5Q2MKA5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna5Q2MKA5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna5Q2MKA5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna5Q2MKA5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Chrna5Q2MKA5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Chrna5Q2MKA5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.82■□□□□ 0.92
Chrna5Q2MKA5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna5Q2MKA5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Chrna5Q2MKA5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna5Q2MKA5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna5Q2MKA5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Chrna5Q2MKA5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna5Q2MKA5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna5Q2MKA5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Chrna5Q2MKA5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna5Q2MKA5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms