Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GabpaQ00422 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.95■□□□□ 0.78
GabpaQ00422 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GabpaQ00422 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
GabpaQ00422 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GabpaQ00422 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GabpaQ00422 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GabpaQ00422 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GabpaQ00422 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
GabpaQ00422 Gm16061-201ENSMUST00000122167 857 ntBASIC19.95■□□□□ 0.78
GabpaQ00422 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GabpaQ00422 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
GabpaQ00422 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GabpaQ00422 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
GabpaQ00422 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GabpaQ00422 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
GabpaQ00422 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GabpaQ00422 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GabpaQ00422 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GabpaQ00422 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
GabpaQ00422 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GabpaQ00422 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
GabpaQ00422 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
GabpaQ00422 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GabpaQ00422 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
GabpaQ00422 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.94■□□□□ 0.78
GabpaQ00422 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GabpaQ00422 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GabpaQ00422 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
GabpaQ00422 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GabpaQ00422 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
GabpaQ00422 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
GabpaQ00422 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GabpaQ00422 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GabpaQ00422 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GabpaQ00422 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GabpaQ00422 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
GabpaQ00422 Gm7370-201ENSMUST00000219471 767 ntBASIC19.93■□□□□ 0.78
GabpaQ00422 Il3ra-202ENSMUST00000223589 738 ntBASIC19.93■□□□□ 0.78
GabpaQ00422 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GabpaQ00422 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GabpaQ00422 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GabpaQ00422 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
GabpaQ00422 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GabpaQ00422 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GabpaQ00422 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GabpaQ00422 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
GabpaQ00422 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
GabpaQ00422 Idnk-204ENSMUST00000226010 1898 ntBASIC19.92■□□□□ 0.78
GabpaQ00422 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GabpaQ00422 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.92■□□□□ 0.78
GabpaQ00422 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GabpaQ00422 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GabpaQ00422 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GabpaQ00422 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
GabpaQ00422 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GabpaQ00422 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
GabpaQ00422 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GabpaQ00422 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GabpaQ00422 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GabpaQ00422 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GabpaQ00422 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.91■□□□□ 0.78
GabpaQ00422 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
GabpaQ00422 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
GabpaQ00422 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GabpaQ00422 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GabpaQ00422 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.91■□□□□ 0.78
GabpaQ00422 Gm37025-201ENSMUST00000195159 829 ntBASIC19.91■□□□□ 0.78
GabpaQ00422 Gm9731-201ENSMUST00000209480 747 ntBASIC19.91■□□□□ 0.78
GabpaQ00422 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GabpaQ00422 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GabpaQ00422 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GabpaQ00422 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GabpaQ00422 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GabpaQ00422 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GabpaQ00422 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
GabpaQ00422 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GabpaQ00422 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GabpaQ00422 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.91■□□□□ 0.78
GabpaQ00422 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GabpaQ00422 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GabpaQ00422 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
GabpaQ00422 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
GabpaQ00422 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.9■□□□□ 0.78
GabpaQ00422 Gm22697-201ENSMUST00000175194 63 ntBASIC19.9■□□□□ 0.78
GabpaQ00422 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.9■□□□□ 0.78
GabpaQ00422 Gm6345-202ENSMUST00000180900 204 ntBASIC19.9■□□□□ 0.78
GabpaQ00422 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.9■□□□□ 0.78
GabpaQ00422 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GabpaQ00422 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GabpaQ00422 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.9■□□□□ 0.78
GabpaQ00422 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
GabpaQ00422 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GabpaQ00422 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
GabpaQ00422 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GabpaQ00422 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GabpaQ00422 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GabpaQ00422 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GabpaQ00422 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GabpaQ00422 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms