Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
IhhP97812 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.22■□□□□ 0.51
IhhP97812 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IhhP97812 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
IhhP97812 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IhhP97812 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IhhP97812 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.22■□□□□ 0.51
IhhP97812 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
IhhP97812 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
IhhP97812 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
IhhP97812 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
IhhP97812 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
IhhP97812 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
IhhP97812 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.22■□□□□ 0.51
IhhP97812 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.22■□□□□ 0.51
IhhP97812 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IhhP97812 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
IhhP97812 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IhhP97812 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
IhhP97812 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.22■□□□□ 0.51
IhhP97812 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IhhP97812 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
IhhP97812 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
IhhP97812 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
IhhP97812 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IhhP97812 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
IhhP97812 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.22■□□□□ 0.51
IhhP97812 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IhhP97812 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IhhP97812 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
IhhP97812 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IhhP97812 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
IhhP97812 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.21■□□□□ 0.51
IhhP97812 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.21■□□□□ 0.51
IhhP97812 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
IhhP97812 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IhhP97812 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IhhP97812 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.21■□□□□ 0.51
IhhP97812 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IhhP97812 Gm7791-201ENSMUST00000219066 539 ntBASIC18.21■□□□□ 0.51
IhhP97812 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IhhP97812 Gm9987-201ENSMUST00000069768 567 ntBASIC18.21■□□□□ 0.51
IhhP97812 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
IhhP97812 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
IhhP97812 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.21■□□□□ 0.51
IhhP97812 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IhhP97812 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IhhP97812 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IhhP97812 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IhhP97812 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IhhP97812 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IhhP97812 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.2■□□□□ 0.5
IhhP97812 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IhhP97812 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
IhhP97812 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.2■□□□□ 0.5
IhhP97812 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.2■□□□□ 0.5
IhhP97812 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IhhP97812 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.2■□□□□ 0.5
IhhP97812 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IhhP97812 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.2■□□□□ 0.5
IhhP97812 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IhhP97812 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IhhP97812 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
IhhP97812 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
IhhP97812 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IhhP97812 Gm6433-201ENSMUST00000118634 875 ntBASIC18.19■□□□□ 0.5
IhhP97812 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
IhhP97812 Gm7889-201ENSMUST00000185591 958 ntBASIC18.19■□□□□ 0.5
IhhP97812 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
IhhP97812 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
IhhP97812 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IhhP97812 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IhhP97812 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
IhhP97812 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IhhP97812 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
IhhP97812 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.19■□□□□ 0.5
IhhP97812 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IhhP97812 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.19■□□□□ 0.5
IhhP97812 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.19■□□□□ 0.5
IhhP97812 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.19■□□□□ 0.5
IhhP97812 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IhhP97812 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
IhhP97812 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
IhhP97812 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
IhhP97812 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.18■□□□□ 0.5
IhhP97812 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
IhhP97812 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.18■□□□□ 0.5
IhhP97812 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.18■□□□□ 0.5
IhhP97812 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IhhP97812 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
IhhP97812 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
IhhP97812 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IhhP97812 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IhhP97812 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IhhP97812 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IhhP97812 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IhhP97812 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IhhP97812 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IhhP97812 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IhhP97812 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms