Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Gm12382-201ENSMUST00000122005 922 ntBASIC16.56■□□□□ 0.24
Nkx3-2P97503 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.56■□□□□ 0.24
Nkx3-2P97503 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.56■□□□□ 0.24
Nkx3-2P97503 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-2P97503 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.56■□□□□ 0.24
Nkx3-2P97503 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Nkx3-2P97503 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx3-2P97503 Gm15565-201ENSMUST00000118890 427 ntBASIC16.55■□□□□ 0.24
Nkx3-2P97503 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx3-2P97503 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Nkx3-2P97503 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.55■□□□□ 0.24
Nkx3-2P97503 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx3-2P97503 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx3-2P97503 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx3-2P97503 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Nkx3-2P97503 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx3-2P97503 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.55■□□□□ 0.24
Nkx3-2P97503 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.55■□□□□ 0.24
Nkx3-2P97503 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx3-2P97503 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.55■□□□□ 0.24
Nkx3-2P97503 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx3-2P97503 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx3-2P97503 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Nkx3-2P97503 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.54■□□□□ 0.24
Nkx3-2P97503 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx3-2P97503 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx3-2P97503 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Nkx3-2P97503 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx3-2P97503 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx3-2P97503 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Nkx3-2P97503 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx3-2P97503 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx3-2P97503 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx3-2P97503 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx3-2P97503 Gm13836-201ENSMUST00000121159 501 ntBASIC16.53■□□□□ 0.24
Nkx3-2P97503 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.53■□□□□ 0.24
Nkx3-2P97503 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx3-2P97503 Timm23-208ENSMUST00000226683 750 ntBASIC16.53■□□□□ 0.24
Nkx3-2P97503 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx3-2P97503 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Nkx3-2P97503 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx3-2P97503 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx3-2P97503 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx3-2P97503 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx3-2P97503 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.53■□□□□ 0.24
Nkx3-2P97503 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Nkx3-2P97503 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx3-2P97503 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.52■□□□□ 0.24
Nkx3-2P97503 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Nkx3-2P97503 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.52■□□□□ 0.24
Nkx3-2P97503 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx3-2P97503 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx3-2P97503 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Nkx3-2P97503 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.52■□□□□ 0.24
Nkx3-2P97503 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.52■□□□□ 0.24
Nkx3-2P97503 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx3-2P97503 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.52■□□□□ 0.24
Nkx3-2P97503 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx3-2P97503 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.52■□□□□ 0.24
Nkx3-2P97503 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.52■□□□□ 0.24
Nkx3-2P97503 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx3-2P97503 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx3-2P97503 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nkx3-2P97503 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nkx3-2P97503 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.52■□□□□ 0.23
Nkx3-2P97503 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms