Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm18958-201ENSMUST00000174258 762 ntBASIC16.14■□□□□ 0.17
Cacna1aP97445 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Cacna1aP97445 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1aP97445 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1aP97445 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1aP97445 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1aP97445 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1aP97445 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cacna1aP97445 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1aP97445 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1aP97445 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.13■□□□□ 0.17
Cacna1aP97445 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Cacna1aP97445 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.13■□□□□ 0.17
Cacna1aP97445 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1aP97445 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1aP97445 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.13■□□□□ 0.17
Cacna1aP97445 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1aP97445 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cacna1aP97445 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cacna1aP97445 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.13■□□□□ 0.17
Cacna1aP97445 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.13■□□□□ 0.17
Cacna1aP97445 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1aP97445 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1aP97445 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.12■□□□□ 0.17
Cacna1aP97445 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1aP97445 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1aP97445 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1aP97445 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.12■□□□□ 0.17
Cacna1aP97445 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1aP97445 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1aP97445 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1aP97445 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.12■□□□□ 0.17
Cacna1aP97445 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1aP97445 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1aP97445 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cacna1aP97445 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.12■□□□□ 0.17
Cacna1aP97445 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.12■□□□□ 0.17
Cacna1aP97445 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1aP97445 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1aP97445 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1aP97445 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1aP97445 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1aP97445 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cacna1aP97445 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1aP97445 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.11■□□□□ 0.17
Cacna1aP97445 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1aP97445 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1aP97445 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1aP97445 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.11■□□□□ 0.17
Cacna1aP97445 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1aP97445 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1aP97445 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1aP97445 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.11■□□□□ 0.17
Cacna1aP97445 Gm27357-201ENSMUST00000183754 135 ntBASIC16.11■□□□□ 0.17
Cacna1aP97445 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1aP97445 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cacna1aP97445 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1aP97445 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1aP97445 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cacna1aP97445 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1aP97445 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1aP97445 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1aP97445 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1aP97445 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1aP97445 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1aP97445 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1aP97445 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1aP97445 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1aP97445 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1aP97445 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1aP97445 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Cacna1aP97445 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cacna1aP97445 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.1■□□□□ 0.17
Cacna1aP97445 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.1■□□□□ 0.17
Cacna1aP97445 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1aP97445 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1aP97445 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1aP97445 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cacna1aP97445 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1aP97445 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1aP97445 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1aP97445 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.1■□□□□ 0.17
Cacna1aP97445 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Cacna1aP97445 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1aP97445 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Cacna1aP97445 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Cacna1aP97445 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Cacna1aP97445 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.09■□□□□ 0.17
Cacna1aP97445 Gm5864-201ENSMUST00000202263 970 ntBASIC16.09■□□□□ 0.17
Cacna1aP97445 Gm34391-201ENSMUST00000203706 907 ntBASIC16.09■□□□□ 0.17
Cacna1aP97445 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1aP97445 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1aP97445 Gm10566-201ENSMUST00000086739 996 ntBASIC16.09■□□□□ 0.17
Cacna1aP97445 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cacna1aP97445 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1aP97445 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1aP97445 Golph3-205ENSMUST00000228671 2842 ntBASIC16.09■□□□□ 0.17
Cacna1aP97445 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1aP97445 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.09■□□□□ 0.17
Cacna1aP97445 Gm11950-201ENSMUST00000121615 838 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms