Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim4P70271 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim4P70271 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim4P70271 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim4P70271 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim4P70271 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pdlim4P70271 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pdlim4P70271 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim4P70271 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim4P70271 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim4P70271 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim4P70271 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim4P70271 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim4P70271 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.57□□□□□ -0.08
Pdlim4P70271 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.57□□□□□ -0.08
Pdlim4P70271 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim4P70271 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Pdlim4P70271 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim4P70271 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim4P70271 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim4P70271 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim4P70271 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim4P70271 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pdlim4P70271 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim4P70271 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
Pdlim4P70271 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim4P70271 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pdlim4P70271 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.56□□□□□ -0.08
Pdlim4P70271 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim4P70271 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim4P70271 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Pdlim4P70271 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim4P70271 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim4P70271 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Pdlim4P70271 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim4P70271 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.56□□□□□ -0.08
Pdlim4P70271 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim4P70271 Gm5643-201ENSMUST00000117081 966 ntBASIC14.56□□□□□ -0.08
Pdlim4P70271 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim4P70271 Gm15375-201ENSMUST00000119510 849 ntBASIC14.56□□□□□ -0.08
Pdlim4P70271 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim4P70271 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.56□□□□□ -0.08
Pdlim4P70271 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.56□□□□□ -0.08
Pdlim4P70271 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim4P70271 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim4P70271 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim4P70271 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim4P70271 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim4P70271 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim4P70271 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim4P70271 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim4P70271 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim4P70271 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim4P70271 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim4P70271 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim4P70271 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim4P70271 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim4P70271 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim4P70271 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim4P70271 Gm22240-201ENSMUST00000175225 82 ntBASIC14.55□□□□□ -0.08
Pdlim4P70271 Mir6349-201ENSMUST00000184059 97 ntBASIC14.55□□□□□ -0.08
Pdlim4P70271 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim4P70271 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim4P70271 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim4P70271 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim4P70271 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.55□□□□□ -0.08
Pdlim4P70271 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim4P70271 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Pdlim4P70271 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim4P70271 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim4P70271 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim4P70271 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim4P70271 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.54□□□□□ -0.08
Pdlim4P70271 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim4P70271 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim4P70271 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pdlim4P70271 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim4P70271 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.54□□□□□ -0.08
Pdlim4P70271 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pdlim4P70271 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.54□□□□□ -0.08
Pdlim4P70271 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.54□□□□□ -0.08
Pdlim4P70271 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim4P70271 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.54□□□□□ -0.08
Pdlim4P70271 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim4P70271 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim4P70271 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim4P70271 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.54□□□□□ -0.08
Pdlim4P70271 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.54□□□□□ -0.08
Pdlim4P70271 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.54□□□□□ -0.08
Pdlim4P70271 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim4P70271 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.54□□□□□ -0.08
Pdlim4P70271 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim4P70271 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim4P70271 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim4P70271 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim4P70271 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim4P70271 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.54□□□□□ -0.08
Pdlim4P70271 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pdlim4P70271 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim4P70271 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms