Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a1P61620 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a1P61620 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Sec61a1P61620 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a1P61620 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Sec61a1P61620 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a1P61620 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a1P61620 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a1P61620 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a1P61620 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Sec61a1P61620 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a1P61620 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Sec61a1P61620 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a1P61620 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a1P61620 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a1P61620 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a1P61620 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Sec61a1P61620 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Sec61a1P61620 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
Sec61a1P61620 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.44■□□□□ 0.06
Sec61a1P61620 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.44■□□□□ 0.06
Sec61a1P61620 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Sec61a1P61620 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Sec61a1P61620 Gm4968-201ENSMUST00000071458 858 ntBASIC15.44■□□□□ 0.06
Sec61a1P61620 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a1P61620 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a1P61620 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a1P61620 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a1P61620 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a1P61620 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Sec61a1P61620 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a1P61620 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a1P61620 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a1P61620 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a1P61620 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a1P61620 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a1P61620 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a1P61620 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Sec61a1P61620 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a1P61620 Gm12441-201ENSMUST00000121806 588 ntBASIC15.43■□□□□ 0.06
Sec61a1P61620 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a1P61620 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.43■□□□□ 0.06
Sec61a1P61620 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a1P61620 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.43■□□□□ 0.06
Sec61a1P61620 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.43■□□□□ 0.06
Sec61a1P61620 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a1P61620 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a1P61620 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a1P61620 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a1P61620 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.43■□□□□ 0.06
Sec61a1P61620 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a1P61620 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.43■□□□□ 0.06
Sec61a1P61620 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a1P61620 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a1P61620 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Sec61a1P61620 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sec61a1P61620 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sec61a1P61620 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Sec61a1P61620 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.42■□□□□ 0.06
Sec61a1P61620 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a1P61620 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sec61a1P61620 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sec61a1P61620 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.41■□□□□ 0.06
Sec61a1P61620 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sec61a1P61620 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sec61a1P61620 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Sec61a1P61620 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sec61a1P61620 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sec61a1P61620 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sec61a1P61620 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sec61a1P61620 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sec61a1P61620 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sec61a1P61620 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sec61a1P61620 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sec61a1P61620 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sec61a1P61620 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sec61a1P61620 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sec61a1P61620 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sec61a1P61620 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sec61a1P61620 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms