Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tpm1P58771 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Tpm1P58771 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Tpm1P58771 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Tpm1P58771 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tpm1P58771 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tpm1P58771 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tpm1P58771 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.6■□□□□ 0.73
Tpm1P58771 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tpm1P58771 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tpm1P58771 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tpm1P58771 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.6■□□□□ 0.73
Tpm1P58771 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Tpm1P58771 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpm1P58771 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.59■□□□□ 0.73
Tpm1P58771 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpm1P58771 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpm1P58771 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpm1P58771 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpm1P58771 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.59■□□□□ 0.73
Tpm1P58771 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Tpm1P58771 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpm1P58771 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.59■□□□□ 0.73
Tpm1P58771 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Tpm1P58771 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpm1P58771 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tpm1P58771 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tpm1P58771 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tpm1P58771 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.58■□□□□ 0.73
Tpm1P58771 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Tpm1P58771 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.58■□□□□ 0.72
Tpm1P58771 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tpm1P58771 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tpm1P58771 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.58■□□□□ 0.72
Tpm1P58771 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Tpm1P58771 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.58■□□□□ 0.72
Tpm1P58771 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tpm1P58771 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tpm1P58771 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tpm1P58771 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Tpm1P58771 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tpm1P58771 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Tpm1P58771 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Tpm1P58771 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm1P58771 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm1P58771 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm1P58771 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm1P58771 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm1P58771 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Tpm1P58771 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm1P58771 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.57■□□□□ 0.72
Tpm1P58771 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Tpm1P58771 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.57■□□□□ 0.72
Tpm1P58771 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm1P58771 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm1P58771 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm1P58771 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm1P58771 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm1P58771 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpm1P58771 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm1P58771 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm1P58771 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm1P58771 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.56■□□□□ 0.72
Tpm1P58771 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Tpm1P58771 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm1P58771 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm1P58771 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm1P58771 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm1P58771 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm1P58771 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm1P58771 Haglr-201ENSMUST00000100000 2085 ntBASIC19.56■□□□□ 0.72
Tpm1P58771 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm1P58771 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm1P58771 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm1P58771 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm1P58771 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
Tpm1P58771 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpm1P58771 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.56■□□□□ 0.72
Tpm1P58771 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm1P58771 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm1P58771 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm1P58771 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm1P58771 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.55■□□□□ 0.72
Tpm1P58771 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm1P58771 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.55■□□□□ 0.72
Tpm1P58771 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm1P58771 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm1P58771 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Tpm1P58771 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm1P58771 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm1P58771 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm1P58771 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm1P58771 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm1P58771 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Tpm1P58771 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm1P58771 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm1P58771 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.54■□□□□ 0.72
Tpm1P58771 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm1P58771 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm1P58771 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms