Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SmoP56726 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SmoP56726 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
SmoP56726 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.63■□□□□ 0.41
SmoP56726 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SmoP56726 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SmoP56726 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SmoP56726 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SmoP56726 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.63■□□□□ 0.41
SmoP56726 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SmoP56726 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.63■□□□□ 0.41
SmoP56726 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SmoP56726 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SmoP56726 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SmoP56726 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SmoP56726 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SmoP56726 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SmoP56726 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SmoP56726 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SmoP56726 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SmoP56726 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SmoP56726 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SmoP56726 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SmoP56726 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SmoP56726 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SmoP56726 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SmoP56726 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SmoP56726 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SmoP56726 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SmoP56726 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SmoP56726 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.62■□□□□ 0.41
SmoP56726 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SmoP56726 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SmoP56726 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SmoP56726 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.62■□□□□ 0.41
SmoP56726 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SmoP56726 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SmoP56726 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SmoP56726 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SmoP56726 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SmoP56726 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SmoP56726 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SmoP56726 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SmoP56726 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SmoP56726 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SmoP56726 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SmoP56726 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SmoP56726 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SmoP56726 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SmoP56726 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SmoP56726 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.61■□□□□ 0.41
SmoP56726 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SmoP56726 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SmoP56726 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.61■□□□□ 0.41
SmoP56726 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SmoP56726 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SmoP56726 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SmoP56726 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SmoP56726 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SmoP56726 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SmoP56726 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SmoP56726 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SmoP56726 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SmoP56726 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SmoP56726 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.6■□□□□ 0.41
SmoP56726 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SmoP56726 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SmoP56726 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.6■□□□□ 0.41
SmoP56726 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.6■□□□□ 0.41
SmoP56726 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SmoP56726 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SmoP56726 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SmoP56726 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SmoP56726 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SmoP56726 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SmoP56726 Gm6433-201ENSMUST00000118634 875 ntBASIC17.6■□□□□ 0.41
SmoP56726 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SmoP56726 Gm7638-201ENSMUST00000121348 967 ntBASIC17.6■□□□□ 0.41
SmoP56726 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SmoP56726 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SmoP56726 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SmoP56726 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SmoP56726 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SmoP56726 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SmoP56726 Gm9987-201ENSMUST00000069768 567 ntBASIC17.6■□□□□ 0.41
SmoP56726 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SmoP56726 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SmoP56726 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SmoP56726 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SmoP56726 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.59■□□□□ 0.41
SmoP56726 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
SmoP56726 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SmoP56726 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SmoP56726 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SmoP56726 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SmoP56726 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.59■□□□□ 0.41
SmoP56726 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.59■□□□□ 0.41
SmoP56726 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SmoP56726 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SmoP56726 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms