Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.67□□□□□ -0.06
Cks2P56390 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cks2P56390 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.67□□□□□ -0.06
Cks2P56390 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks2P56390 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cks2P56390 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks2P56390 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cks2P56390 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks2P56390 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks2P56390 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cks2P56390 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks2P56390 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks2P56390 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.66□□□□□ -0.06
Cks2P56390 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks2P56390 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks2P56390 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.66□□□□□ -0.06
Cks2P56390 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks2P56390 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks2P56390 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks2P56390 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.66□□□□□ -0.06
Cks2P56390 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.66□□□□□ -0.06
Cks2P56390 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks2P56390 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cks2P56390 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks2P56390 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks2P56390 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cks2P56390 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.66□□□□□ -0.06
Cks2P56390 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks2P56390 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Cks2P56390 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks2P56390 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks2P56390 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Cks2P56390 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks2P56390 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.66□□□□□ -0.06
Cks2P56390 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks2P56390 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks2P56390 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks2P56390 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks2P56390 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.65□□□□□ -0.06
Cks2P56390 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks2P56390 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cks2P56390 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks2P56390 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks2P56390 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cks2P56390 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cks2P56390 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cks2P56390 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks2P56390 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cks2P56390 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks2P56390 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks2P56390 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks2P56390 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks2P56390 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks2P56390 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks2P56390 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks2P56390 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks2P56390 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cks2P56390 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Cks2P56390 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.64□□□□□ -0.07
Cks2P56390 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.64□□□□□ -0.07
Cks2P56390 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.64□□□□□ -0.07
Cks2P56390 Gm7514-201ENSMUST00000209475 934 ntBASIC14.64□□□□□ -0.07
Cks2P56390 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks2P56390 Gm10493-201ENSMUST00000097270 612 ntBASIC14.64□□□□□ -0.07
Cks2P56390 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cks2P56390 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cks2P56390 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cks2P56390 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cks2P56390 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks2P56390 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks2P56390 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks2P56390 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks2P56390 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks2P56390 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks2P56390 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.63□□□□□ -0.07
Cks2P56390 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks2P56390 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cks2P56390 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cks2P56390 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cks2P56390 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks2P56390 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks2P56390 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.63□□□□□ -0.07
Cks2P56390 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks2P56390 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks2P56390 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cks2P56390 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Cks2P56390 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.63□□□□□ -0.07
Cks2P56390 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cks2P56390 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cks2P56390 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks2P56390 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks2P56390 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.63□□□□□ -0.07
Cks2P56390 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks2P56390 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cks2P56390 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks2P56390 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cks2P56390 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cks2P56390 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cks2P56390 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cks2P56390 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms