Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nub1P54729 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nub1P54729 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.85■□□□□ 0.61
Nub1P54729 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.85■□□□□ 0.61
Nub1P54729 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nub1P54729 Gm43183-201ENSMUST00000200632 547 ntBASIC18.85■□□□□ 0.61
Nub1P54729 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Nub1P54729 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.85■□□□□ 0.61
Nub1P54729 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nub1P54729 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nub1P54729 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.85■□□□□ 0.61
Nub1P54729 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nub1P54729 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nub1P54729 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nub1P54729 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nub1P54729 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nub1P54729 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nub1P54729 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nub1P54729 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nub1P54729 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nub1P54729 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nub1P54729 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.84■□□□□ 0.61
Nub1P54729 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nub1P54729 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nub1P54729 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nub1P54729 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nub1P54729 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nub1P54729 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nub1P54729 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.84■□□□□ 0.61
Nub1P54729 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nub1P54729 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nub1P54729 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
Nub1P54729 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.83■□□□□ 0.6
Nub1P54729 Gm11643-201ENSMUST00000119578 864 ntBASIC18.83■□□□□ 0.6
Nub1P54729 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nub1P54729 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nub1P54729 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nub1P54729 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nub1P54729 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nub1P54729 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nub1P54729 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nub1P54729 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nub1P54729 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nub1P54729 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nub1P54729 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Nub1P54729 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nub1P54729 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nub1P54729 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nub1P54729 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nub1P54729 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nub1P54729 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nub1P54729 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nub1P54729 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nub1P54729 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nub1P54729 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nub1P54729 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nub1P54729 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nub1P54729 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nub1P54729 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nub1P54729 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nub1P54729 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nub1P54729 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
Nub1P54729 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nub1P54729 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nub1P54729 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nub1P54729 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nub1P54729 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nub1P54729 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nub1P54729 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nub1P54729 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nub1P54729 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nub1P54729 Gm10418-201ENSMUST00000100943 576 ntBASIC18.81■□□□□ 0.6
Nub1P54729 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.81■□□□□ 0.6
Nub1P54729 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nub1P54729 Gm6576-201ENSMUST00000169678 883 ntBASIC18.81■□□□□ 0.6
Nub1P54729 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.81■□□□□ 0.6
Nub1P54729 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nub1P54729 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nub1P54729 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.81■□□□□ 0.6
Nub1P54729 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nub1P54729 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nub1P54729 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nub1P54729 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nub1P54729 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nub1P54729 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nub1P54729 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nub1P54729 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nub1P54729 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nub1P54729 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nub1P54729 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nub1P54729 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nub1P54729 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nub1P54729 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nub1P54729 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nub1P54729 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.8■□□□□ 0.6
Nub1P54729 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nub1P54729 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.8■□□□□ 0.6
Nub1P54729 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Nub1P54729 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nub1P54729 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms