Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Msh6P54276 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Msh6P54276 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Msh6P54276 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Msh6P54276 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Msh6P54276 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Msh6P54276 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Msh6P54276 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Msh6P54276 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Msh6P54276 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Msh6P54276 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Msh6P54276 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Msh6P54276 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Msh6P54276 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Msh6P54276 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC22.31■■□□□ 1.16
Msh6P54276 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Msh6P54276 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Msh6P54276 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC22.31■■□□□ 1.16
Msh6P54276 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Msh6P54276 AC130713.1-201ENSMUST00000228853 1096 ntBASIC22.31■■□□□ 1.16
Msh6P54276 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Msh6P54276 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Msh6P54276 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Msh6P54276 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Msh6P54276 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Msh6P54276 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Msh6P54276 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Msh6P54276 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
Msh6P54276 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC22.3■■□□□ 1.16
Msh6P54276 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Msh6P54276 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Msh6P54276 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Msh6P54276 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Msh6P54276 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Msh6P54276 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Msh6P54276 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Msh6P54276 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Msh6P54276 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Msh6P54276 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Msh6P54276 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Msh6P54276 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Msh6P54276 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Msh6P54276 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Msh6P54276 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Msh6P54276 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Msh6P54276 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Msh6P54276 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Msh6P54276 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Msh6P54276 Gm9013-201ENSMUST00000132939 882 ntBASIC22.29■■□□□ 1.16
Msh6P54276 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC22.29■■□□□ 1.16
Msh6P54276 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Msh6P54276 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC22.29■■□□□ 1.16
Msh6P54276 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Msh6P54276 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Msh6P54276 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Msh6P54276 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Msh6P54276 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Msh6P54276 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Msh6P54276 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Msh6P54276 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC22.29■■□□□ 1.16
Msh6P54276 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Msh6P54276 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC22.29■■□□□ 1.16
Msh6P54276 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Msh6P54276 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Msh6P54276 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Msh6P54276 Gm29518-201ENSMUST00000190858 372 ntBASIC22.28■■□□□ 1.16
Msh6P54276 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC22.28■■□□□ 1.16
Msh6P54276 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Msh6P54276 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Msh6P54276 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC22.28■■□□□ 1.16
Msh6P54276 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Msh6P54276 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Msh6P54276 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC22.27■■□□□ 1.16
Msh6P54276 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Msh6P54276 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Msh6P54276 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Msh6P54276 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Msh6P54276 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Msh6P54276 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Msh6P54276 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Msh6P54276 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Msh6P54276 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Msh6P54276 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Msh6P54276 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC22.26■■□□□ 1.15
Msh6P54276 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Msh6P54276 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Msh6P54276 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Msh6P54276 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Msh6P54276 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC22.25■■□□□ 1.15
Msh6P54276 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Msh6P54276 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Msh6P54276 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Msh6P54276 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC22.25■■□□□ 1.15
Msh6P54276 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Msh6P54276 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC22.25■■□□□ 1.15
Msh6P54276 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Msh6P54276 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Msh6P54276 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Msh6P54276 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Msh6P54276 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms