Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Lhx4P53776 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Lhx4P53776 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.84□□□□□ -0.03
Lhx4P53776 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.84□□□□□ -0.03
Lhx4P53776 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.84□□□□□ -0.03
Lhx4P53776 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.84□□□□□ -0.03
Lhx4P53776 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lhx4P53776 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lhx4P53776 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lhx4P53776 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lhx4P53776 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lhx4P53776 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lhx4P53776 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.84□□□□□ -0.03
Lhx4P53776 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lhx4P53776 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lhx4P53776 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lhx4P53776 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lhx4P53776 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lhx4P53776 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lhx4P53776 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lhx4P53776 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lhx4P53776 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lhx4P53776 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lhx4P53776 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lhx4P53776 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.83□□□□□ -0.04
Lhx4P53776 Gm2399-201ENSMUST00000104944 225 ntBASIC14.83□□□□□ -0.04
Lhx4P53776 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.83□□□□□ -0.04
Lhx4P53776 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lhx4P53776 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lhx4P53776 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lhx4P53776 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Lhx4P53776 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lhx4P53776 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Lhx4P53776 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lhx4P53776 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lhx4P53776 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lhx4P53776 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lhx4P53776 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
Lhx4P53776 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Lhx4P53776 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lhx4P53776 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lhx4P53776 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.82□□□□□ -0.04
Lhx4P53776 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.82□□□□□ -0.04
Lhx4P53776 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.82□□□□□ -0.04
Lhx4P53776 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lhx4P53776 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lhx4P53776 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lhx4P53776 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lhx4P53776 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lhx4P53776 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lhx4P53776 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.82□□□□□ -0.04
Lhx4P53776 Dio3-201ENSMUST00000097228 1449 ntBASIC14.82□□□□□ -0.04
Lhx4P53776 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lhx4P53776 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lhx4P53776 Tgds-204ENSMUST00000228543 1594 ntBASIC14.81□□□□□ -0.04
Lhx4P53776 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Lhx4P53776 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx4P53776 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lhx4P53776 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx4P53776 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.81□□□□□ -0.04
Lhx4P53776 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Lhx4P53776 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lhx4P53776 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx4P53776 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx4P53776 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx4P53776 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx4P53776 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx4P53776 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.81□□□□□ -0.04
Lhx4P53776 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.81□□□□□ -0.04
Lhx4P53776 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lhx4P53776 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx4P53776 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx4P53776 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Lhx4P53776 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx4P53776 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx4P53776 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Lhx4P53776 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Lhx4P53776 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Lhx4P53776 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx4P53776 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.8□□□□□ -0.04
Lhx4P53776 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.8□□□□□ -0.04
Lhx4P53776 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx4P53776 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx4P53776 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx4P53776 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Lhx4P53776 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx4P53776 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Lhx4P53776 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx4P53776 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx4P53776 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx4P53776 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Lhx4P53776 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx4P53776 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx4P53776 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx4P53776 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx4P53776 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx4P53776 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx4P53776 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx4P53776 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.79□□□□□ -0.04
Lhx4P53776 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms