Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SftpbP50405 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SftpbP50405 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SftpbP50405 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SftpbP50405 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SftpbP50405 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.95■□□□□ 0.46
SftpbP50405 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SftpbP50405 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.95■□□□□ 0.46
SftpbP50405 Gm42569-201ENSMUST00000200539 472 ntBASIC17.95■□□□□ 0.46
SftpbP50405 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SftpbP50405 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SftpbP50405 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SftpbP50405 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SftpbP50405 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SftpbP50405 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SftpbP50405 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SftpbP50405 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SftpbP50405 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SftpbP50405 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.95■□□□□ 0.46
SftpbP50405 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SftpbP50405 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SftpbP50405 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SftpbP50405 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SftpbP50405 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SftpbP50405 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SftpbP50405 Gm6211-202ENSMUST00000167849 925 ntBASIC17.94■□□□□ 0.46
SftpbP50405 Gm18284-201ENSMUST00000172604 624 ntBASIC17.94■□□□□ 0.46
SftpbP50405 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SftpbP50405 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SftpbP50405 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SftpbP50405 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SftpbP50405 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SftpbP50405 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SftpbP50405 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SftpbP50405 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.94■□□□□ 0.46
SftpbP50405 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SftpbP50405 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SftpbP50405 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SftpbP50405 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SftpbP50405 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SftpbP50405 Gm10849-201ENSMUST00000100397 618 ntBASIC17.93■□□□□ 0.46
SftpbP50405 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SftpbP50405 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SftpbP50405 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SftpbP50405 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SftpbP50405 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.93■□□□□ 0.46
SftpbP50405 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SftpbP50405 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SftpbP50405 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SftpbP50405 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SftpbP50405 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SftpbP50405 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SftpbP50405 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.92■□□□□ 0.46
SftpbP50405 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SftpbP50405 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SftpbP50405 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SftpbP50405 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SftpbP50405 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
SftpbP50405 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.92■□□□□ 0.46
SftpbP50405 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.92■□□□□ 0.46
SftpbP50405 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SftpbP50405 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SftpbP50405 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SftpbP50405 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SftpbP50405 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SftpbP50405 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SftpbP50405 Gm2399-201ENSMUST00000104944 225 ntBASIC17.91■□□□□ 0.46
SftpbP50405 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.91■□□□□ 0.46
SftpbP50405 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.91■□□□□ 0.46
SftpbP50405 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SftpbP50405 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SftpbP50405 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SftpbP50405 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SftpbP50405 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SftpbP50405 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SftpbP50405 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SftpbP50405 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.91■□□□□ 0.46
SftpbP50405 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SftpbP50405 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SftpbP50405 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SftpbP50405 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SftpbP50405 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SftpbP50405 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SftpbP50405 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SftpbP50405 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SftpbP50405 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SftpbP50405 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SftpbP50405 Gm7290-201ENSMUST00000104990 617 ntBASIC17.9■□□□□ 0.46
SftpbP50405 Gm12918-201ENSMUST00000120234 636 ntBASIC17.9■□□□□ 0.46
SftpbP50405 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.9■□□□□ 0.46
SftpbP50405 Gm15710-201ENSMUST00000121821 636 ntBASIC17.9■□□□□ 0.46
SftpbP50405 Gm5075-201ENSMUST00000196916 622 ntBASIC17.9■□□□□ 0.46
SftpbP50405 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SftpbP50405 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.9■□□□□ 0.46
SftpbP50405 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.9■□□□□ 0.46
SftpbP50405 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SftpbP50405 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.9■□□□□ 0.46
SftpbP50405 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SftpbP50405 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
SftpbP50405 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms