Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ercc3P49135 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.77■□□□□ 0.92
Ercc3P49135 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ercc3P49135 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ercc3P49135 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc3P49135 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc3P49135 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc3P49135 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc3P49135 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.76■□□□□ 0.91
Ercc3P49135 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc3P49135 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc3P49135 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc3P49135 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc3P49135 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc3P49135 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc3P49135 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ercc3P49135 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc3P49135 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.75■□□□□ 0.91
Ercc3P49135 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc3P49135 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.75■□□□□ 0.91
Ercc3P49135 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc3P49135 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc3P49135 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.75■□□□□ 0.91
Ercc3P49135 Gm10517-202ENSMUST00000192970 758 ntBASIC20.75■□□□□ 0.91
Ercc3P49135 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.75■□□□□ 0.91
Ercc3P49135 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc3P49135 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc3P49135 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc3P49135 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ercc3P49135 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc3P49135 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc3P49135 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc3P49135 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc3P49135 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc3P49135 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.74■□□□□ 0.91
Ercc3P49135 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc3P49135 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc3P49135 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.74■□□□□ 0.91
Ercc3P49135 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.74■□□□□ 0.91
Ercc3P49135 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc3P49135 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc3P49135 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc3P49135 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc3P49135 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.74■□□□□ 0.91
Ercc3P49135 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.74■□□□□ 0.91
Ercc3P49135 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.74■□□□□ 0.91
Ercc3P49135 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc3P49135 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc3P49135 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc3P49135 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc3P49135 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc3P49135 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc3P49135 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc3P49135 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Ercc3P49135 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc3P49135 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.73■□□□□ 0.91
Ercc3P49135 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ercc3P49135 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc3P49135 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc3P49135 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc3P49135 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Ercc3P49135 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc3P49135 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.73■□□□□ 0.91
Ercc3P49135 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc3P49135 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc3P49135 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc3P49135 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc3P49135 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Ercc3P49135 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.73■□□□□ 0.91
Ercc3P49135 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.73■□□□□ 0.91
Ercc3P49135 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ercc3P49135 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ercc3P49135 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
Ercc3P49135 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ercc3P49135 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ercc3P49135 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.72■□□□□ 0.91
Ercc3P49135 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.72■□□□□ 0.91
Ercc3P49135 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ercc3P49135 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ercc3P49135 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ercc3P49135 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ercc3P49135 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ercc3P49135 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ercc3P49135 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ercc3P49135 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ercc3P49135 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Ercc3P49135 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ercc3P49135 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ercc3P49135 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ercc3P49135 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ercc3P49135 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.71■□□□□ 0.91
Ercc3P49135 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.71■□□□□ 0.91
Ercc3P49135 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ercc3P49135 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ercc3P49135 Mir6982-201ENSMUST00000184354 68 ntBASIC20.71■□□□□ 0.91
Ercc3P49135 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.71■□□□□ 0.91
Ercc3P49135 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.71■□□□□ 0.91
Ercc3P49135 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ercc3P49135 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Ercc3P49135 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms