Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.86■□□□□ 0.13
Rfx3P48381 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx3P48381 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx3P48381 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx3P48381 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.86■□□□□ 0.13
Rfx3P48381 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rfx3P48381 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx3P48381 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx3P48381 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx3P48381 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx3P48381 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx3P48381 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx3P48381 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx3P48381 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.85■□□□□ 0.13
Rfx3P48381 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx3P48381 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.85■□□□□ 0.13
Rfx3P48381 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Rfx3P48381 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.85■□□□□ 0.13
Rfx3P48381 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rfx3P48381 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx3P48381 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx3P48381 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx3P48381 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx3P48381 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx3P48381 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Rfx3P48381 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Rfx3P48381 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Rfx3P48381 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx3P48381 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx3P48381 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.85■□□□□ 0.13
Rfx3P48381 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx3P48381 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx3P48381 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx3P48381 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.85■□□□□ 0.13
Rfx3P48381 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx3P48381 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx3P48381 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx3P48381 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx3P48381 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx3P48381 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx3P48381 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx3P48381 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx3P48381 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx3P48381 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx3P48381 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx3P48381 Mir5133-201ENSMUST00000174955 77 ntBASIC15.84■□□□□ 0.13
Rfx3P48381 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx3P48381 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx3P48381 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx3P48381 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx3P48381 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx3P48381 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx3P48381 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx3P48381 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Rfx3P48381 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Rfx3P48381 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx3P48381 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx3P48381 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx3P48381 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx3P48381 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx3P48381 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx3P48381 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx3P48381 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx3P48381 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Rfx3P48381 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx3P48381 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx3P48381 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.83■□□□□ 0.12
Rfx3P48381 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx3P48381 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Rfx3P48381 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx3P48381 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx3P48381 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Rfx3P48381 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.83■□□□□ 0.12
Rfx3P48381 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx3P48381 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rfx3P48381 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx3P48381 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx3P48381 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx3P48381 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.83■□□□□ 0.12
Rfx3P48381 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.83■□□□□ 0.12
Rfx3P48381 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx3P48381 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx3P48381 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx3P48381 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx3P48381 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.82■□□□□ 0.12
Rfx3P48381 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx3P48381 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx3P48381 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx3P48381 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.82■□□□□ 0.12
Rfx3P48381 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.82■□□□□ 0.12
Rfx3P48381 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx3P48381 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.82■□□□□ 0.12
Rfx3P48381 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx3P48381 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx3P48381 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx3P48381 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx3P48381 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx3P48381 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rfx3P48381 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rfx3P48381 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms