Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gli1P47806 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gli1P47806 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gli1P47806 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gli1P47806 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gli1P47806 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.12■□□□□ 0.33
Gli1P47806 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gli1P47806 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gli1P47806 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.11■□□□□ 0.33
Gli1P47806 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gli1P47806 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gli1P47806 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Gli1P47806 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gli1P47806 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gli1P47806 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gli1P47806 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.11■□□□□ 0.33
Gli1P47806 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.11■□□□□ 0.33
Gli1P47806 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.11■□□□□ 0.33
Gli1P47806 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gli1P47806 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gli1P47806 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gli1P47806 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gli1P47806 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gli1P47806 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gli1P47806 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gli1P47806 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli1P47806 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli1P47806 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.1■□□□□ 0.33
Gli1P47806 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli1P47806 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli1P47806 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gli1P47806 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli1P47806 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli1P47806 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gli1P47806 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli1P47806 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gli1P47806 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli1P47806 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gli1P47806 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli1P47806 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli1P47806 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gli1P47806 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli1P47806 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Gli1P47806 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli1P47806 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gli1P47806 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli1P47806 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.09■□□□□ 0.33
Gli1P47806 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
Gli1P47806 Gm8969-201ENSMUST00000199694 526 ntBASIC17.09■□□□□ 0.33
Gli1P47806 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli1P47806 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gli1P47806 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.09■□□□□ 0.33
Gli1P47806 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.09■□□□□ 0.33
Gli1P47806 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.09■□□□□ 0.33
Gli1P47806 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli1P47806 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli1P47806 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli1P47806 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli1P47806 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.09■□□□□ 0.33
Gli1P47806 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gli1P47806 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gli1P47806 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gli1P47806 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gli1P47806 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.08■□□□□ 0.33
Gli1P47806 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gli1P47806 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.08■□□□□ 0.32
Gli1P47806 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Gli1P47806 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.08■□□□□ 0.32
Gli1P47806 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli1P47806 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli1P47806 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Gli1P47806 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli1P47806 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli1P47806 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.08■□□□□ 0.32
Gli1P47806 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli1P47806 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli1P47806 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli1P47806 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli1P47806 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.08■□□□□ 0.32
Gli1P47806 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli1P47806 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli1P47806 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.07■□□□□ 0.32
Gli1P47806 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli1P47806 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Gli1P47806 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gli1P47806 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.07■□□□□ 0.32
Gli1P47806 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli1P47806 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Gli1P47806 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli1P47806 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Gli1P47806 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.07■□□□□ 0.32
Gli1P47806 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Gli1P47806 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli1P47806 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli1P47806 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli1P47806 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.07■□□□□ 0.32
Gli1P47806 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli1P47806 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli1P47806 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli1P47806 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms