Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nedd4P46935 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Nedd4P46935 Iqck-206ENSMUST00000208658 2891 ntBASIC21.11■□□□□ 0.97
Nedd4P46935 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nedd4P46935 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nedd4P46935 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.1■□□□□ 0.97
Nedd4P46935 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nedd4P46935 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nedd4P46935 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC21.1■□□□□ 0.97
Nedd4P46935 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC21.1■□□□□ 0.97
Nedd4P46935 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC21.1■□□□□ 0.97
Nedd4P46935 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC21.1■□□□□ 0.97
Nedd4P46935 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Nedd4P46935 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nedd4P46935 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Nedd4P46935 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Nedd4P46935 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nedd4P46935 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nedd4P46935 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nedd4P46935 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nedd4P46935 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nedd4P46935 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nedd4P46935 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Nedd4P46935 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC21.09■□□□□ 0.97
Nedd4P46935 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.09■□□□□ 0.97
Nedd4P46935 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nedd4P46935 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nedd4P46935 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Nedd4P46935 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nedd4P46935 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC21.08■□□□□ 0.97
Nedd4P46935 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Nedd4P46935 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nedd4P46935 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC21.08■□□□□ 0.97
Nedd4P46935 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nedd4P46935 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nedd4P46935 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nedd4P46935 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.96
Nedd4P46935 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Nedd4P46935 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nedd4P46935 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nedd4P46935 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nedd4P46935 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nedd4P46935 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.07■□□□□ 0.96
Nedd4P46935 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nedd4P46935 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC21.07■□□□□ 0.96
Nedd4P46935 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nedd4P46935 Gm10052-201ENSMUST00000168019 960 ntBASIC21.07■□□□□ 0.96
Nedd4P46935 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC21.07■□□□□ 0.96
Nedd4P46935 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nedd4P46935 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC21.07■□□□□ 0.96
Nedd4P46935 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.07■□□□□ 0.96
Nedd4P46935 Gm7729-201ENSMUST00000050143 801 ntBASIC21.07■□□□□ 0.96
Nedd4P46935 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Nedd4P46935 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nedd4P46935 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nedd4P46935 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nedd4P46935 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.07■□□□□ 0.96
Nedd4P46935 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.07■□□□□ 0.96
Nedd4P46935 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.06■□□□□ 0.96
Nedd4P46935 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nedd4P46935 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nedd4P46935 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nedd4P46935 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nedd4P46935 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC21.06■□□□□ 0.96
Nedd4P46935 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nedd4P46935 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nedd4P46935 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC21.05■□□□□ 0.96
Nedd4P46935 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nedd4P46935 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nedd4P46935 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nedd4P46935 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nedd4P46935 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Nedd4P46935 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nedd4P46935 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nedd4P46935 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd4P46935 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd4P46935 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd4P46935 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd4P46935 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd4P46935 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd4P46935 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd4P46935 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Nedd4P46935 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC21.04■□□□□ 0.96
Nedd4P46935 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.04■□□□□ 0.96
Nedd4P46935 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd4P46935 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC21.04■□□□□ 0.96
Nedd4P46935 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC21.04■□□□□ 0.96
Nedd4P46935 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd4P46935 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
Nedd4P46935 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd4P46935 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd4P46935 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd4P46935 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd4P46935 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd4P46935 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd4P46935 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd4P46935 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd4P46935 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd4P46935 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC21.04■□□□□ 0.96
Nedd4P46935 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms