Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h1aP43275 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Hist1h1aP43275 Gm7514-201ENSMUST00000209475 934 ntBASIC14.48□□□□□ -0.09
Hist1h1aP43275 Gm18671-201ENSMUST00000214826 683 ntBASIC14.48□□□□□ -0.09
Hist1h1aP43275 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h1aP43275 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.48□□□□□ -0.09
Hist1h1aP43275 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h1aP43275 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Hist1h1aP43275 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.48□□□□□ -0.09
Hist1h1aP43275 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.48□□□□□ -0.09
Hist1h1aP43275 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h1aP43275 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h1aP43275 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h1aP43275 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h1aP43275 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h1aP43275 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.48□□□□□ -0.09
Hist1h1aP43275 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hist1h1aP43275 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Hist1h1aP43275 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h1aP43275 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hist1h1aP43275 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h1aP43275 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h1aP43275 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h1aP43275 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h1aP43275 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h1aP43275 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.46□□□□□ -0.09
Hist1h1aP43275 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.46□□□□□ -0.09
Hist1h1aP43275 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h1aP43275 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h1aP43275 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h1aP43275 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.46□□□□□ -0.09
Hist1h1aP43275 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Hist1h1aP43275 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h1aP43275 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h1aP43275 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Hist1h1aP43275 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h1aP43275 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hist1h1aP43275 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hist1h1aP43275 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.46□□□□□ -0.1
Hist1h1aP43275 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hist1h1aP43275 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hist1h1aP43275 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.45□□□□□ -0.1
Hist1h1aP43275 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hist1h1aP43275 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hist1h1aP43275 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hist1h1aP43275 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.45□□□□□ -0.1
Hist1h1aP43275 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Hist1h1aP43275 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hist1h1aP43275 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hist1h1aP43275 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hist1h1aP43275 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Hist1h1aP43275 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hist1h1aP43275 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hist1h1aP43275 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hist1h1aP43275 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hist1h1aP43275 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hist1h1aP43275 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hist1h1aP43275 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hist1h1aP43275 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hist1h1aP43275 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms