Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
HmgclP38060 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HmgclP38060 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HmgclP38060 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HmgclP38060 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.28■□□□□ 0.36
HmgclP38060 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HmgclP38060 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HmgclP38060 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HmgclP38060 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
HmgclP38060 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HmgclP38060 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HmgclP38060 Gm27011-201ENSMUST00000182352 972 ntBASIC17.27■□□□□ 0.36
HmgclP38060 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HmgclP38060 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HmgclP38060 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HmgclP38060 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HmgclP38060 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
HmgclP38060 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HmgclP38060 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HmgclP38060 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HmgclP38060 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HmgclP38060 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HmgclP38060 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HmgclP38060 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
HmgclP38060 Gm4974-201ENSMUST00000209974 875 ntBASIC17.26■□□□□ 0.35
HmgclP38060 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.26■□□□□ 0.35
HmgclP38060 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HmgclP38060 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HmgclP38060 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HmgclP38060 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HmgclP38060 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HmgclP38060 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.26■□□□□ 0.35
HmgclP38060 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HmgclP38060 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HmgclP38060 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HmgclP38060 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HmgclP38060 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HmgclP38060 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HmgclP38060 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HmgclP38060 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HmgclP38060 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HmgclP38060 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HmgclP38060 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.25■□□□□ 0.35
HmgclP38060 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
HmgclP38060 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HmgclP38060 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HmgclP38060 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HmgclP38060 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.24■□□□□ 0.35
HmgclP38060 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.24■□□□□ 0.35
HmgclP38060 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HmgclP38060 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.24■□□□□ 0.35
HmgclP38060 Gm10517-202ENSMUST00000192970 758 ntBASIC17.24■□□□□ 0.35
HmgclP38060 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.24■□□□□ 0.35
HmgclP38060 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HmgclP38060 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HmgclP38060 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HmgclP38060 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HmgclP38060 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HmgclP38060 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.24■□□□□ 0.35
HmgclP38060 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HmgclP38060 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HmgclP38060 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HmgclP38060 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HmgclP38060 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HmgclP38060 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HmgclP38060 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HmgclP38060 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HmgclP38060 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.23■□□□□ 0.35
HmgclP38060 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HmgclP38060 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HmgclP38060 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HmgclP38060 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HmgclP38060 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HmgclP38060 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HmgclP38060 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
HmgclP38060 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HmgclP38060 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HmgclP38060 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HmgclP38060 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HmgclP38060 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HmgclP38060 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HmgclP38060 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HmgclP38060 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HmgclP38060 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HmgclP38060 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HmgclP38060 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
HmgclP38060 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.22■□□□□ 0.35
HmgclP38060 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HmgclP38060 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.22■□□□□ 0.35
HmgclP38060 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HmgclP38060 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HmgclP38060 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
HmgclP38060 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HmgclP38060 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HmgclP38060 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HmgclP38060 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.22■□□□□ 0.35
HmgclP38060 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HmgclP38060 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HmgclP38060 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HmgclP38060 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms