Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.46■□□□□ 0.39
LdlrP35951 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.46■□□□□ 0.39
LdlrP35951 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.46■□□□□ 0.39
LdlrP35951 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LdlrP35951 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.46■□□□□ 0.39
LdlrP35951 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LdlrP35951 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LdlrP35951 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LdlrP35951 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LdlrP35951 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
LdlrP35951 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LdlrP35951 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LdlrP35951 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LdlrP35951 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LdlrP35951 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
LdlrP35951 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
LdlrP35951 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.45■□□□□ 0.38
LdlrP35951 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.45■□□□□ 0.38
LdlrP35951 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.45■□□□□ 0.38
LdlrP35951 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LdlrP35951 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LdlrP35951 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LdlrP35951 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LdlrP35951 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LdlrP35951 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LdlrP35951 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
LdlrP35951 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.45■□□□□ 0.38
LdlrP35951 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LdlrP35951 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LdlrP35951 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LdlrP35951 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.44■□□□□ 0.38
LdlrP35951 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LdlrP35951 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LdlrP35951 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LdlrP35951 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.44■□□□□ 0.38
LdlrP35951 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LdlrP35951 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LdlrP35951 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LdlrP35951 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LdlrP35951 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LdlrP35951 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.43■□□□□ 0.38
LdlrP35951 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LdlrP35951 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LdlrP35951 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
LdlrP35951 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.43■□□□□ 0.38
LdlrP35951 Trmt13-210ENSMUST00000198454 880 ntBASIC17.43■□□□□ 0.38
LdlrP35951 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.43■□□□□ 0.38
LdlrP35951 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LdlrP35951 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LdlrP35951 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LdlrP35951 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.43■□□□□ 0.38
LdlrP35951 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.43■□□□□ 0.38
LdlrP35951 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LdlrP35951 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.43■□□□□ 0.38
LdlrP35951 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LdlrP35951 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LdlrP35951 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.43■□□□□ 0.38
LdlrP35951 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LdlrP35951 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LdlrP35951 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LdlrP35951 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LdlrP35951 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LdlrP35951 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LdlrP35951 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LdlrP35951 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.42■□□□□ 0.38
LdlrP35951 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LdlrP35951 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LdlrP35951 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LdlrP35951 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LdlrP35951 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.42■□□□□ 0.38
LdlrP35951 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LdlrP35951 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LdlrP35951 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LdlrP35951 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LdlrP35951 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LdlrP35951 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LdlrP35951 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LdlrP35951 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LdlrP35951 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LdlrP35951 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LdlrP35951 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LdlrP35951 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LdlrP35951 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.41■□□□□ 0.38
LdlrP35951 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LdlrP35951 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LdlrP35951 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LdlrP35951 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.41■□□□□ 0.38
LdlrP35951 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LdlrP35951 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LdlrP35951 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LdlrP35951 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LdlrP35951 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.41■□□□□ 0.38
LdlrP35951 Gm26524-201ENSMUST00000192339 390 ntBASIC17.41■□□□□ 0.38
LdlrP35951 Gm7977-201ENSMUST00000193787 748 ntBASIC17.41■□□□□ 0.38
LdlrP35951 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.41■□□□□ 0.38
LdlrP35951 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LdlrP35951 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LdlrP35951 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LdlrP35951 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LdlrP35951 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms