Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.17■□□□□ 0.66
Sox5P35710 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox5P35710 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox5P35710 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Sox5P35710 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sox5P35710 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox5P35710 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Sox5P35710 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox5P35710 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sox5P35710 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Sox5P35710 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox5P35710 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sox5P35710 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.16■□□□□ 0.66
Sox5P35710 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox5P35710 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox5P35710 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Sox5P35710 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox5P35710 Gm7290-201ENSMUST00000104990 617 ntBASIC19.16■□□□□ 0.66
Sox5P35710 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sox5P35710 Gm12918-201ENSMUST00000120234 636 ntBASIC19.16■□□□□ 0.66
Sox5P35710 Gm15710-201ENSMUST00000121821 636 ntBASIC19.16■□□□□ 0.66
Sox5P35710 Gm5075-201ENSMUST00000196916 622 ntBASIC19.16■□□□□ 0.66
Sox5P35710 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.16■□□□□ 0.66
Sox5P35710 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.16■□□□□ 0.66
Sox5P35710 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.16■□□□□ 0.66
Sox5P35710 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox5P35710 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sox5P35710 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox5P35710 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox5P35710 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sox5P35710 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.16■□□□□ 0.66
Sox5P35710 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox5P35710 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Sox5P35710 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox5P35710 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.15■□□□□ 0.66
Sox5P35710 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox5P35710 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Sox5P35710 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Sox5P35710 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sox5P35710 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox5P35710 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox5P35710 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Sox5P35710 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sox5P35710 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.15■□□□□ 0.66
Sox5P35710 Gm44549-201ENSMUST00000208351 577 ntBASIC19.15■□□□□ 0.66
Sox5P35710 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox5P35710 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox5P35710 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox5P35710 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox5P35710 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.15■□□□□ 0.66
Sox5P35710 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.15■□□□□ 0.66
Sox5P35710 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox5P35710 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox5P35710 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Sox5P35710 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox5P35710 Gm10849-201ENSMUST00000100397 618 ntBASIC19.14■□□□□ 0.65
Sox5P35710 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox5P35710 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox5P35710 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sox5P35710 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox5P35710 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Sox5P35710 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox5P35710 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox5P35710 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox5P35710 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox5P35710 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox5P35710 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox5P35710 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox5P35710 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox5P35710 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox5P35710 Gm10418-201ENSMUST00000100943 576 ntBASIC19.13■□□□□ 0.65
Sox5P35710 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.13■□□□□ 0.65
Sox5P35710 Mir2861-201ENSMUST00000175539 82 ntBASIC19.13■□□□□ 0.65
Sox5P35710 Gm26571-201ENSMUST00000181399 666 ntBASIC19.13■□□□□ 0.65
Sox5P35710 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.13■□□□□ 0.65
Sox5P35710 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Sox5P35710 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Sox5P35710 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Sox5P35710 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sox5P35710 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox5P35710 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Sox5P35710 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox5P35710 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox5P35710 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.12■□□□□ 0.65
Sox5P35710 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sox5P35710 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.12■□□□□ 0.65
Sox5P35710 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox5P35710 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.12■□□□□ 0.65
Sox5P35710 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.12■□□□□ 0.65
Sox5P35710 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox5P35710 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sox5P35710 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox5P35710 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.12■□□□□ 0.65
Sox5P35710 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.12■□□□□ 0.65
Sox5P35710 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Sox5P35710 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox5P35710 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox5P35710 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox5P35710 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox5P35710 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms