Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a13P31649 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a13P31649 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a13P31649 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a13P31649 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a13P31649 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.78■□□□□ 0.44
Slc6a13P31649 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a13P31649 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a13P31649 Mir1199-201ENSMUST00000117015 119 ntBASIC17.78■□□□□ 0.44
Slc6a13P31649 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a13P31649 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a13P31649 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a13P31649 Gm8969-201ENSMUST00000199694 526 ntBASIC17.78■□□□□ 0.44
Slc6a13P31649 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a13P31649 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.78■□□□□ 0.44
Slc6a13P31649 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a13P31649 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a13P31649 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a13P31649 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Slc6a13P31649 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a13P31649 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.78■□□□□ 0.44
Slc6a13P31649 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a13P31649 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Slc6a13P31649 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Slc6a13P31649 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a13P31649 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a13P31649 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a13P31649 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a13P31649 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Slc6a13P31649 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a13P31649 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a13P31649 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.77■□□□□ 0.44
Slc6a13P31649 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.77■□□□□ 0.44
Slc6a13P31649 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a13P31649 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Slc6a13P31649 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a13P31649 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Slc6a13P31649 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc6a13P31649 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc6a13P31649 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc6a13P31649 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc6a13P31649 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a13P31649 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a13P31649 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a13P31649 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Slc6a13P31649 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.76■□□□□ 0.43
Slc6a13P31649 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a13P31649 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a13P31649 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.76■□□□□ 0.43
Slc6a13P31649 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.76■□□□□ 0.43
Slc6a13P31649 Gm4974-201ENSMUST00000209974 875 ntBASIC17.76■□□□□ 0.43
Slc6a13P31649 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a13P31649 Gm10812-201ENSMUST00000099864 546 ntBASIC17.76■□□□□ 0.43
Slc6a13P31649 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a13P31649 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.76■□□□□ 0.43
Slc6a13P31649 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a13P31649 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Slc6a13P31649 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a13P31649 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a13P31649 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a13P31649 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.75■□□□□ 0.43
Slc6a13P31649 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Slc6a13P31649 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a13P31649 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.75■□□□□ 0.43
Slc6a13P31649 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.75■□□□□ 0.43
Slc6a13P31649 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.75■□□□□ 0.43
Slc6a13P31649 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Slc6a13P31649 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a13P31649 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.75■□□□□ 0.43
Slc6a13P31649 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.75■□□□□ 0.43
Slc6a13P31649 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a13P31649 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a13P31649 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a13P31649 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a13P31649 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a13P31649 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a13P31649 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a13P31649 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a13P31649 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a13P31649 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a13P31649 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.74■□□□□ 0.43
Slc6a13P31649 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.74■□□□□ 0.43
Slc6a13P31649 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Slc6a13P31649 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.74■□□□□ 0.43
Slc6a13P31649 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a13P31649 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a13P31649 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a13P31649 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a13P31649 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.74■□□□□ 0.43
Slc6a13P31649 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a13P31649 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.73■□□□□ 0.43
Slc6a13P31649 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a13P31649 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a13P31649 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a13P31649 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.73■□□□□ 0.43
Slc6a13P31649 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a13P31649 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Slc6a13P31649 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a13P31649 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a13P31649 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms