Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a1P31648 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a1P31648 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a1P31648 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a1P31648 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a1P31648 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.09■□□□□ 0.01
Slc6a1P31648 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a1P31648 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a1P31648 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a1P31648 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.09■□□□□ 0.01
Slc6a1P31648 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a1P31648 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a1P31648 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a1P31648 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Slc6a1P31648 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Slc6a1P31648 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Slc6a1P31648 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a1P31648 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.08■□□□□ 0
Slc6a1P31648 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.08■□□□□ 0
Slc6a1P31648 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.08■□□□□ 0
Slc6a1P31648 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.08■□□□□ 0
Slc6a1P31648 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.08■□□□□ 0
Slc6a1P31648 Gm27801-201ENSMUST00000184174 223 ntBASIC15.08■□□□□ 0
Slc6a1P31648 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
Slc6a1P31648 Gm42642-201ENSMUST00000200683 355 ntBASIC15.08■□□□□ 0
Slc6a1P31648 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a1P31648 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.08■□□□□ 0
Slc6a1P31648 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a1P31648 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Slc6a1P31648 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a1P31648 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.08■□□□□ 0
Slc6a1P31648 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a1P31648 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a1P31648 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a1P31648 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.08■□□□□ 0
Slc6a1P31648 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Slc6a1P31648 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a1P31648 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a1P31648 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a1P31648 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.07■□□□□ 0
Slc6a1P31648 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
Slc6a1P31648 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a1P31648 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a1P31648 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a1P31648 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a1P31648 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.07■□□□□ 0
Slc6a1P31648 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.07■□□□□ 0
Slc6a1P31648 Gm18671-201ENSMUST00000214826 683 ntBASIC15.07■□□□□ 0
Slc6a1P31648 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.07■□□□□ 0
Slc6a1P31648 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a1P31648 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.07■□□□□ 0
Slc6a1P31648 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a1P31648 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Slc6a1P31648 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a1P31648 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a1P31648 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.07■□□□□ 0
Slc6a1P31648 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Slc6a1P31648 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
Slc6a1P31648 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.06■□□□□ 0
Slc6a1P31648 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a1P31648 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a1P31648 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.06■□□□□ 0
Slc6a1P31648 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a1P31648 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a1P31648 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Slc6a1P31648 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Slc6a1P31648 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.06■□□□□ 0
Slc6a1P31648 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a1P31648 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.06■□□□□ 0
Slc6a1P31648 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a1P31648 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a1P31648 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Slc6a1P31648 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.06■□□□□ 0
Slc6a1P31648 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.06■□□□□ 0
Slc6a1P31648 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a1P31648 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a1P31648 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.06■□□□□ 0
Slc6a1P31648 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.06■□□□□ 0
Slc6a1P31648 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a1P31648 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Slc6a1P31648 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Slc6a1P31648 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.05■□□□□ 0
Slc6a1P31648 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Slc6a1P31648 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Slc6a1P31648 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Slc6a1P31648 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Slc6a1P31648 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Slc6a1P31648 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Slc6a1P31648 Gm42778-201ENSMUST00000199644 553 ntBASIC15.05■□□□□ -0
Slc6a1P31648 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Slc6a1P31648 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Slc6a1P31648 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Slc6a1P31648 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Slc6a1P31648 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Slc6a1P31648 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.05■□□□□ -0
Slc6a1P31648 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.05■□□□□ -0
Slc6a1P31648 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Slc6a1P31648 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a1P31648 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Slc6a1P31648 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms