Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vcam1P29533 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vcam1P29533 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vcam1P29533 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vcam1P29533 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vcam1P29533 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vcam1P29533 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vcam1P29533 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.23■□□□□ 0.83
Vcam1P29533 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vcam1P29533 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vcam1P29533 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.23■□□□□ 0.83
Vcam1P29533 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vcam1P29533 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vcam1P29533 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Vcam1P29533 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vcam1P29533 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vcam1P29533 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
Vcam1P29533 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.22■□□□□ 0.83
Vcam1P29533 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vcam1P29533 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.22■□□□□ 0.83
Vcam1P29533 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Vcam1P29533 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vcam1P29533 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Vcam1P29533 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vcam1P29533 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vcam1P29533 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vcam1P29533 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vcam1P29533 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vcam1P29533 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Vcam1P29533 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vcam1P29533 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.21■□□□□ 0.83
Vcam1P29533 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.21■□□□□ 0.83
Vcam1P29533 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.21■□□□□ 0.83
Vcam1P29533 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vcam1P29533 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vcam1P29533 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vcam1P29533 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vcam1P29533 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Vcam1P29533 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.21■□□□□ 0.83
Vcam1P29533 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.21■□□□□ 0.83
Vcam1P29533 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vcam1P29533 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Vcam1P29533 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vcam1P29533 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vcam1P29533 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vcam1P29533 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Vcam1P29533 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Vcam1P29533 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.2■□□□□ 0.82
Vcam1P29533 Gm27389-201ENSMUST00000183622 195 ntBASIC20.2■□□□□ 0.82
Vcam1P29533 Gm10566-201ENSMUST00000086739 996 ntBASIC20.2■□□□□ 0.82
Vcam1P29533 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.2■□□□□ 0.82
Vcam1P29533 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vcam1P29533 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vcam1P29533 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vcam1P29533 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcam1P29533 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcam1P29533 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.19■□□□□ 0.82
Vcam1P29533 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcam1P29533 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.19■□□□□ 0.82
Vcam1P29533 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcam1P29533 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcam1P29533 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Vcam1P29533 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcam1P29533 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.19■□□□□ 0.82
Vcam1P29533 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Vcam1P29533 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcam1P29533 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.18■□□□□ 0.82
Vcam1P29533 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vcam1P29533 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.18■□□□□ 0.82
Vcam1P29533 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vcam1P29533 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Vcam1P29533 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Vcam1P29533 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vcam1P29533 Gm25016-201ENSMUST00000158399 131 ntBASIC20.18■□□□□ 0.82
Vcam1P29533 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vcam1P29533 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vcam1P29533 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vcam1P29533 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.18■□□□□ 0.82
Vcam1P29533 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vcam1P29533 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vcam1P29533 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vcam1P29533 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.17■□□□□ 0.82
Vcam1P29533 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.17■□□□□ 0.82
Vcam1P29533 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vcam1P29533 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.17■□□□□ 0.82
Vcam1P29533 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vcam1P29533 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.17■□□□□ 0.82
Vcam1P29533 Gm5587-201ENSMUST00000206270 674 ntBASIC20.17■□□□□ 0.82
Vcam1P29533 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Vcam1P29533 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vcam1P29533 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vcam1P29533 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vcam1P29533 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vcam1P29533 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vcam1P29533 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Vcam1P29533 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vcam1P29533 Grk6-206ENSMUST00000224995 2971 ntBASIC20.16■□□□□ 0.82
Vcam1P29533 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vcam1P29533 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vcam1P29533 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms