Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RxrbP28704 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RxrbP28704 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RxrbP28704 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RxrbP28704 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RxrbP28704 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RxrbP28704 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RxrbP28704 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RxrbP28704 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RxrbP28704 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RxrbP28704 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RxrbP28704 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.62■□□□□ 0.41
RxrbP28704 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.62■□□□□ 0.41
RxrbP28704 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RxrbP28704 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RxrbP28704 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.62■□□□□ 0.41
RxrbP28704 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.62■□□□□ 0.41
RxrbP28704 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RxrbP28704 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RxrbP28704 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RxrbP28704 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.62■□□□□ 0.41
RxrbP28704 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.62■□□□□ 0.41
RxrbP28704 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
RxrbP28704 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.61■□□□□ 0.41
RxrbP28704 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.61■□□□□ 0.41
RxrbP28704 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.61■□□□□ 0.41
RxrbP28704 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.61■□□□□ 0.41
RxrbP28704 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.61■□□□□ 0.41
RxrbP28704 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RxrbP28704 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RxrbP28704 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RxrbP28704 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RxrbP28704 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RxrbP28704 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.6■□□□□ 0.41
RxrbP28704 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RxrbP28704 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
RxrbP28704 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RxrbP28704 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RxrbP28704 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.6■□□□□ 0.41
RxrbP28704 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RxrbP28704 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RxrbP28704 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RxrbP28704 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RxrbP28704 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RxrbP28704 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RxrbP28704 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RxrbP28704 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RxrbP28704 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RxrbP28704 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RxrbP28704 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RxrbP28704 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RxrbP28704 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RxrbP28704 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RxrbP28704 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RxrbP28704 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RxrbP28704 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RxrbP28704 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RxrbP28704 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.58■□□□□ 0.4
RxrbP28704 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RxrbP28704 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RxrbP28704 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RxrbP28704 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RxrbP28704 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
RxrbP28704 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.57■□□□□ 0.4
RxrbP28704 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RxrbP28704 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
RxrbP28704 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RxrbP28704 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RxrbP28704 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RxrbP28704 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RxrbP28704 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RxrbP28704 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RxrbP28704 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RxrbP28704 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RxrbP28704 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.57■□□□□ 0.4
RxrbP28704 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.57■□□□□ 0.4
RxrbP28704 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RxrbP28704 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RxrbP28704 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RxrbP28704 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RxrbP28704 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.57■□□□□ 0.4
RxrbP28704 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms