Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nckap1P28660 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nckap1P28660 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nckap1P28660 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nckap1P28660 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nckap1P28660 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nckap1P28660 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Nckap1P28660 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Nckap1P28660 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nckap1P28660 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nckap1P28660 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nckap1P28660 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nckap1P28660 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nckap1P28660 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nckap1P28660 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Nckap1P28660 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nckap1P28660 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.43■□□□□ 0.38
Nckap1P28660 Gm6659-201ENSMUST00000174752 547 ntBASIC17.43■□□□□ 0.38
Nckap1P28660 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.43■□□□□ 0.38
Nckap1P28660 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.43■□□□□ 0.38
Nckap1P28660 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nckap1P28660 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nckap1P28660 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nckap1P28660 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nckap1P28660 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Nckap1P28660 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nckap1P28660 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nckap1P28660 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Nckap1P28660 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nckap1P28660 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nckap1P28660 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nckap1P28660 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.42■□□□□ 0.38
Nckap1P28660 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nckap1P28660 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Nckap1P28660 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Nckap1P28660 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nckap1P28660 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.42■□□□□ 0.38
Nckap1P28660 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nckap1P28660 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nckap1P28660 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nckap1P28660 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nckap1P28660 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nckap1P28660 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nckap1P28660 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nckap1P28660 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.42■□□□□ 0.38
Nckap1P28660 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nckap1P28660 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nckap1P28660 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Nckap1P28660 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nckap1P28660 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nckap1P28660 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nckap1P28660 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.41■□□□□ 0.38
Nckap1P28660 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nckap1P28660 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nckap1P28660 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.41■□□□□ 0.38
Nckap1P28660 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.41■□□□□ 0.38
Nckap1P28660 Gm10013-201ENSMUST00000106074 672 ntBASIC17.41■□□□□ 0.38
Nckap1P28660 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nckap1P28660 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nckap1P28660 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Nckap1P28660 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nckap1P28660 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nckap1P28660 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nckap1P28660 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.41■□□□□ 0.38
Nckap1P28660 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nckap1P28660 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nckap1P28660 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nckap1P28660 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nckap1P28660 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nckap1P28660 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nckap1P28660 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nckap1P28660 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nckap1P28660 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Nckap1P28660 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.4■□□□□ 0.38
Nckap1P28660 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nckap1P28660 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nckap1P28660 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.4■□□□□ 0.38
Nckap1P28660 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nckap1P28660 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nckap1P28660 Gm13401-201ENSMUST00000117074 291 ntBASIC17.4■□□□□ 0.38
Nckap1P28660 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.4■□□□□ 0.38
Nckap1P28660 Gm24841-201ENSMUST00000158676 357 ntBASIC17.4■□□□□ 0.38
Nckap1P28660 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.4■□□□□ 0.38
Nckap1P28660 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nckap1P28660 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nckap1P28660 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nckap1P28660 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nckap1P28660 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.4■□□□□ 0.38
Nckap1P28660 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Nckap1P28660 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Nckap1P28660 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nckap1P28660 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nckap1P28660 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nckap1P28660 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nckap1P28660 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.39■□□□□ 0.37
Nckap1P28660 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nckap1P28660 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nckap1P28660 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.39■□□□□ 0.37
Nckap1P28660 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nckap1P28660 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms