Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Aldh1a1P24549 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Aldh1a1P24549 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Aldh1a1P24549 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Aldh1a1P24549 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.8■□□□□ 0.6
Aldh1a1P24549 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Aldh1a1P24549 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Aldh1a1P24549 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Aldh1a1P24549 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.79■□□□□ 0.6
Aldh1a1P24549 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Aldh1a1P24549 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Aldh1a1P24549 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Aldh1a1P24549 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Aldh1a1P24549 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.79■□□□□ 0.6
Aldh1a1P24549 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Aldh1a1P24549 Gm6443-201ENSMUST00000203599 874 ntBASIC18.79■□□□□ 0.6
Aldh1a1P24549 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Aldh1a1P24549 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Aldh1a1P24549 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.79■□□□□ 0.6
Aldh1a1P24549 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Aldh1a1P24549 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Aldh1a1P24549 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Aldh1a1P24549 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Aldh1a1P24549 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Aldh1a1P24549 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.78■□□□□ 0.6
Aldh1a1P24549 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Aldh1a1P24549 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Aldh1a1P24549 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Aldh1a1P24549 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Aldh1a1P24549 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Aldh1a1P24549 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Aldh1a1P24549 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Aldh1a1P24549 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Aldh1a1P24549 Mir770-201ENSMUST00000103252 94 ntBASIC18.78■□□□□ 0.6
Aldh1a1P24549 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.78■□□□□ 0.6
Aldh1a1P24549 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Aldh1a1P24549 Gm37722-201ENSMUST00000193757 208 ntBASIC18.78■□□□□ 0.6
Aldh1a1P24549 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.78■□□□□ 0.6
Aldh1a1P24549 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Aldh1a1P24549 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Aldh1a1P24549 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Aldh1a1P24549 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Aldh1a1P24549 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.78■□□□□ 0.6
Aldh1a1P24549 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Aldh1a1P24549 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Aldh1a1P24549 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.77■□□□□ 0.6
Aldh1a1P24549 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Aldh1a1P24549 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Aldh1a1P24549 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Aldh1a1P24549 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Aldh1a1P24549 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.77■□□□□ 0.6
Aldh1a1P24549 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.77■□□□□ 0.6
Aldh1a1P24549 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Aldh1a1P24549 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Aldh1a1P24549 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Aldh1a1P24549 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Aldh1a1P24549 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Aldh1a1P24549 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Aldh1a1P24549 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Aldh1a1P24549 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Aldh1a1P24549 Tgds-204ENSMUST00000228543 1594 ntBASIC18.76■□□□□ 0.59
Aldh1a1P24549 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Aldh1a1P24549 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Aldh1a1P24549 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Aldh1a1P24549 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Aldh1a1P24549 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Aldh1a1P24549 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.76■□□□□ 0.59
Aldh1a1P24549 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Aldh1a1P24549 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Aldh1a1P24549 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Aldh1a1P24549 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.76■□□□□ 0.59
Aldh1a1P24549 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Aldh1a1P24549 Gm28659-201ENSMUST00000188013 759 ntBASIC18.76■□□□□ 0.59
Aldh1a1P24549 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Aldh1a1P24549 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Aldh1a1P24549 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Aldh1a1P24549 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Aldh1a1P24549 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Aldh1a1P24549 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Aldh1a1P24549 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Aldh1a1P24549 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Aldh1a1P24549 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Aldh1a1P24549 Actl10-202ENSMUST00000226583 1501 ntBASIC18.75■□□□□ 0.59
Aldh1a1P24549 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Aldh1a1P24549 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Aldh1a1P24549 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Aldh1a1P24549 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Aldh1a1P24549 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Aldh1a1P24549 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Aldh1a1P24549 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.75■□□□□ 0.59
Aldh1a1P24549 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.75■□□□□ 0.59
Aldh1a1P24549 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.75■□□□□ 0.59
Aldh1a1P24549 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.75■□□□□ 0.59
Aldh1a1P24549 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Aldh1a1P24549 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Aldh1a1P24549 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Aldh1a1P24549 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Aldh1a1P24549 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Aldh1a1P24549 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.74■□□□□ 0.59
Aldh1a1P24549 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms