Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Cdx1P18111 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Cdx1P18111 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdx1P18111 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx1P18111 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx1P18111 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx1P18111 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx1P18111 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cdx1P18111 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx1P18111 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx1P18111 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdx1P18111 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx1P18111 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx1P18111 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx1P18111 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx1P18111 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdx1P18111 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx1P18111 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx1P18111 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx1P18111 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx1P18111 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Cdx1P18111 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Cdx1P18111 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cdx1P18111 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx1P18111 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cdx1P18111 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx1P18111 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx1P18111 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx1P18111 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx1P18111 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdx1P18111 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.15□□□□□ -0.15
Cdx1P18111 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx1P18111 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx1P18111 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx1P18111 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx1P18111 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.14□□□□□ -0.15
Cdx1P18111 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cdx1P18111 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx1P18111 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.14□□□□□ -0.15
Cdx1P18111 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx1P18111 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.14□□□□□ -0.15
Cdx1P18111 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx1P18111 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx1P18111 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Cdx1P18111 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cdx1P18111 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdx1P18111 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.14□□□□□ -0.15
Cdx1P18111 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx1P18111 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx1P18111 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx1P18111 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx1P18111 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx1P18111 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx1P18111 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx1P18111 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Cdx1P18111 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.13□□□□□ -0.15
Cdx1P18111 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx1P18111 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx1P18111 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Cdx1P18111 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx1P18111 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cdx1P18111 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx1P18111 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx1P18111 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx1P18111 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.13□□□□□ -0.15
Cdx1P18111 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx1P18111 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdx1P18111 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdx1P18111 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx1P18111 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx1P18111 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx1P18111 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx1P18111 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx1P18111 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx1P18111 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cdx1P18111 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx1P18111 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx1P18111 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx1P18111 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Cdx1P18111 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx1P18111 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx1P18111 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx1P18111 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cdx1P18111 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx1P18111 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx1P18111 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cdx1P18111 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cdx1P18111 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx1P18111 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Cdx1P18111 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Cdx1P18111 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx1P18111 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx1P18111 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx1P18111 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx1P18111 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx1P18111 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx1P18111 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx1P18111 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Cdx1P18111 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx1P18111 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms