Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmga1P17095 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Hmga1P17095 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmga1P17095 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmga1P17095 Gm16061-201ENSMUST00000122167 857 ntBASIC17.95■□□□□ 0.46
Hmga1P17095 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.95■□□□□ 0.46
Hmga1P17095 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmga1P17095 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.95■□□□□ 0.46
Hmga1P17095 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.95■□□□□ 0.46
Hmga1P17095 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.95■□□□□ 0.46
Hmga1P17095 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.95■□□□□ 0.46
Hmga1P17095 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Hmga1P17095 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmga1P17095 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmga1P17095 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmga1P17095 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Hmga1P17095 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga1P17095 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga1P17095 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga1P17095 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga1P17095 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga1P17095 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hmga1P17095 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Hmga1P17095 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga1P17095 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga1P17095 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga1P17095 Gm17661-201ENSMUST00000170317 270 ntBASIC17.94■□□□□ 0.46
Hmga1P17095 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga1P17095 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.94■□□□□ 0.46
Hmga1P17095 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga1P17095 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga1P17095 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga1P17095 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.94■□□□□ 0.46
Hmga1P17095 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga1P17095 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga1P17095 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga1P17095 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmga1P17095 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmga1P17095 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmga1P17095 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmga1P17095 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmga1P17095 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmga1P17095 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmga1P17095 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmga1P17095 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmga1P17095 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmga1P17095 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Hmga1P17095 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmga1P17095 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.93■□□□□ 0.46
Hmga1P17095 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Hmga1P17095 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmga1P17095 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Hmga1P17095 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmga1P17095 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmga1P17095 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmga1P17095 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmga1P17095 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmga1P17095 Gm10013-201ENSMUST00000106074 672 ntBASIC17.92■□□□□ 0.46
Hmga1P17095 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmga1P17095 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmga1P17095 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmga1P17095 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.92■□□□□ 0.46
Hmga1P17095 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.92■□□□□ 0.46
Hmga1P17095 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmga1P17095 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmga1P17095 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmga1P17095 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmga1P17095 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.91■□□□□ 0.46
Hmga1P17095 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga1P17095 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga1P17095 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.91■□□□□ 0.46
Hmga1P17095 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga1P17095 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga1P17095 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga1P17095 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga1P17095 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga1P17095 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga1P17095 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Hmga1P17095 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga1P17095 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Hmga1P17095 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga1P17095 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga1P17095 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.91■□□□□ 0.46
Hmga1P17095 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga1P17095 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga1P17095 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmga1P17095 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Hmga1P17095 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.9■□□□□ 0.46
Hmga1P17095 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hmga1P17095 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hmga1P17095 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmga1P17095 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmga1P17095 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmga1P17095 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmga1P17095 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.9■□□□□ 0.46
Hmga1P17095 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmga1P17095 Gm13474-201ENSMUST00000122466 815 ntBASIC17.9■□□□□ 0.46
Hmga1P17095 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hmga1P17095 Gm23634-201ENSMUST00000175071 91 ntBASIC17.9■□□□□ 0.46
Hmga1P17095 Gm22697-201ENSMUST00000175194 63 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms