Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd44P15379 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd44P15379 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd44P15379 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd44P15379 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd44P15379 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd44P15379 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd44P15379 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cd44P15379 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd44P15379 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd44P15379 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd44P15379 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cd44P15379 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd44P15379 Gm7290-201ENSMUST00000104990 617 ntBASIC18.42■□□□□ 0.54
Cd44P15379 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd44P15379 Gm13401-201ENSMUST00000117074 291 ntBASIC18.42■□□□□ 0.54
Cd44P15379 Gm12918-201ENSMUST00000120234 636 ntBASIC18.42■□□□□ 0.54
Cd44P15379 Gm15710-201ENSMUST00000121821 636 ntBASIC18.42■□□□□ 0.54
Cd44P15379 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.42■□□□□ 0.54
Cd44P15379 Gm5075-201ENSMUST00000196916 622 ntBASIC18.42■□□□□ 0.54
Cd44P15379 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd44P15379 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cd44P15379 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cd44P15379 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.42■□□□□ 0.54
Cd44P15379 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.42■□□□□ 0.54
Cd44P15379 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd44P15379 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd44P15379 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Cd44P15379 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cd44P15379 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd44P15379 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd44P15379 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd44P15379 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd44P15379 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd44P15379 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd44P15379 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd44P15379 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd44P15379 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cd44P15379 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd44P15379 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd44P15379 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cd44P15379 Gm26524-201ENSMUST00000192339 390 ntBASIC18.41■□□□□ 0.54
Cd44P15379 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.41■□□□□ 0.54
Cd44P15379 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.41■□□□□ 0.54
Cd44P15379 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.41■□□□□ 0.54
Cd44P15379 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.41■□□□□ 0.54
Cd44P15379 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cd44P15379 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd44P15379 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cd44P15379 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cd44P15379 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cd44P15379 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd44P15379 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd44P15379 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cd44P15379 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Cd44P15379 Gm18284-201ENSMUST00000172604 624 ntBASIC18.4■□□□□ 0.54
Cd44P15379 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd44P15379 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd44P15379 Mtag2-201ENSMUST00000058665 714 ntBASIC18.4■□□□□ 0.54
Cd44P15379 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd44P15379 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cd44P15379 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cd44P15379 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd44P15379 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd44P15379 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cd44P15379 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.39■□□□□ 0.53
Cd44P15379 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd44P15379 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cd44P15379 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd44P15379 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd44P15379 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.39■□□□□ 0.53
Cd44P15379 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd44P15379 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd44P15379 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd44P15379 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd44P15379 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd44P15379 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cd44P15379 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd44P15379 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.38■□□□□ 0.53
Cd44P15379 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.38■□□□□ 0.53
Cd44P15379 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.38■□□□□ 0.53
Cd44P15379 Gm42569-201ENSMUST00000200539 472 ntBASIC18.38■□□□□ 0.53
Cd44P15379 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cd44P15379 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.38■□□□□ 0.53
Cd44P15379 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd44P15379 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd44P15379 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd44P15379 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.38■□□□□ 0.53
Cd44P15379 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.38■□□□□ 0.53
Cd44P15379 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cd44P15379 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cd44P15379 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd44P15379 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd44P15379 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd44P15379 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cd44P15379 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cd44P15379 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.37■□□□□ 0.53
Cd44P15379 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cd44P15379 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.37■□□□□ 0.53
Cd44P15379 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms