Protein–RNA interactions for Protein: P0DP28

Calm3, Calmodulin-3, mousemouse

Known RBP Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calm3P0DP28 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.23■□□□□ 0.83
Calm3P0DP28 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Calm3P0DP28 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Calm3P0DP28 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Calm3P0DP28 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Calm3P0DP28 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Calm3P0DP28 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Calm3P0DP28 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Calm3P0DP28 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Calm3P0DP28 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.22■□□□□ 0.83
Calm3P0DP28 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.22■□□□□ 0.83
Calm3P0DP28 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Calm3P0DP28 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Calm3P0DP28 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Calm3P0DP28 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Calm3P0DP28 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Calm3P0DP28 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Calm3P0DP28 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Calm3P0DP28 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Calm3P0DP28 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Calm3P0DP28 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Calm3P0DP28 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Calm3P0DP28 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Calm3P0DP28 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Calm3P0DP28 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Calm3P0DP28 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Calm3P0DP28 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.21■□□□□ 0.83
Calm3P0DP28 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Calm3P0DP28 Timm23-208ENSMUST00000226683 750 ntBASIC20.21■□□□□ 0.83
Calm3P0DP28 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Calm3P0DP28 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Calm3P0DP28 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Calm3P0DP28 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Calm3P0DP28 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Calm3P0DP28 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Calm3P0DP28 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Calm3P0DP28 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Calm3P0DP28 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Calm3P0DP28 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Calm3P0DP28 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Calm3P0DP28 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Calm3P0DP28 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.2■□□□□ 0.82
Calm3P0DP28 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.2■□□□□ 0.82
Calm3P0DP28 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Calm3P0DP28 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Calm3P0DP28 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Calm3P0DP28 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.2■□□□□ 0.82
Calm3P0DP28 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.2■□□□□ 0.82
Calm3P0DP28 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Calm3P0DP28 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Calm3P0DP28 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Calm3P0DP28 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Calm3P0DP28 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Calm3P0DP28 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Calm3P0DP28 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Calm3P0DP28 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.19■□□□□ 0.82
Calm3P0DP28 Gm24841-201ENSMUST00000158676 357 ntBASIC20.19■□□□□ 0.82
Calm3P0DP28 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Calm3P0DP28 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Calm3P0DP28 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.19■□□□□ 0.82
Calm3P0DP28 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.19■□□□□ 0.82
Calm3P0DP28 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Calm3P0DP28 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Calm3P0DP28 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Calm3P0DP28 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Calm3P0DP28 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.19■□□□□ 0.82
Calm3P0DP28 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Calm3P0DP28 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calm3P0DP28 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calm3P0DP28 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calm3P0DP28 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.18■□□□□ 0.82
Calm3P0DP28 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calm3P0DP28 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calm3P0DP28 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.18■□□□□ 0.82
Calm3P0DP28 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Calm3P0DP28 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.18■□□□□ 0.82
Calm3P0DP28 Mir5122-201ENSMUST00000175004 89 ntBASIC20.18■□□□□ 0.82
Calm3P0DP28 Odf3b-204ENSMUST00000227834 930 ntBASIC20.18■□□□□ 0.82
Calm3P0DP28 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calm3P0DP28 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calm3P0DP28 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calm3P0DP28 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calm3P0DP28 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calm3P0DP28 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calm3P0DP28 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calm3P0DP28 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Calm3P0DP28 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.17■□□□□ 0.82
Calm3P0DP28 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Calm3P0DP28 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Calm3P0DP28 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Calm3P0DP28 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.17■□□□□ 0.82
Calm3P0DP28 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Calm3P0DP28 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Calm3P0DP28 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.17■□□□□ 0.82
Calm3P0DP28 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Calm3P0DP28 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Calm3P0DP28 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.17■□□□□ 0.82
Calm3P0DP28 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Calm3P0DP28 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Calm3P0DP28 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms