Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim1P0C8K7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Smim1P0C8K7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim1P0C8K7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim1P0C8K7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim1P0C8K7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim1P0C8K7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim1P0C8K7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.09□□□□□ -0.47
Smim1P0C8K7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim1P0C8K7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smim1P0C8K7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smim1P0C8K7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Gm8770-201ENSMUST00000121113 1109 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms