Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp6P0C0A3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp6P0C0A3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.06■□□□□ 0.64
Chmp6P0C0A3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp6P0C0A3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp6P0C0A3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp6P0C0A3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Chmp6P0C0A3 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.06■□□□□ 0.64
Chmp6P0C0A3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.06■□□□□ 0.64
Chmp6P0C0A3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.06■□□□□ 0.64
Chmp6P0C0A3 Gm10138-203ENSMUST00000206952 366 ntBASIC19.06■□□□□ 0.64
Chmp6P0C0A3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp6P0C0A3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp6P0C0A3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp6P0C0A3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp6P0C0A3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.06■□□□□ 0.64
Chmp6P0C0A3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp6P0C0A3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Gm10812-201ENSMUST00000099864 546 ntBASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp6P0C0A3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp6P0C0A3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp6P0C0A3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp6P0C0A3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp6P0C0A3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Chmp6P0C0A3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp6P0C0A3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp6P0C0A3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.04■□□□□ 0.64
Chmp6P0C0A3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp6P0C0A3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp6P0C0A3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp6P0C0A3 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.04■□□□□ 0.64
Chmp6P0C0A3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
Chmp6P0C0A3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp6P0C0A3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.03■□□□□ 0.64
Chmp6P0C0A3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp6P0C0A3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Chmp6P0C0A3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp6P0C0A3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp6P0C0A3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp6P0C0A3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.03■□□□□ 0.64
Chmp6P0C0A3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp6P0C0A3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp6P0C0A3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp6P0C0A3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp6P0C0A3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp6P0C0A3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp6P0C0A3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp6P0C0A3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp6P0C0A3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp6P0C0A3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp6P0C0A3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp6P0C0A3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.02■□□□□ 0.64
Chmp6P0C0A3 Gm15375-201ENSMUST00000119510 849 ntBASIC19.02■□□□□ 0.64
Chmp6P0C0A3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.02■□□□□ 0.64
Chmp6P0C0A3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp6P0C0A3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp6P0C0A3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp6P0C0A3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp6P0C0A3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp6P0C0A3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp6P0C0A3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Chmp6P0C0A3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chmp6P0C0A3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Chmp6P0C0A3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chmp6P0C0A3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Chmp6P0C0A3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp6P0C0A3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Chmp6P0C0A3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp6P0C0A3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Chmp6P0C0A3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp6P0C0A3 Gm15378-201ENSMUST00000121894 207 ntBASIC19.01■□□□□ 0.63
Chmp6P0C0A3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.01■□□□□ 0.63
Chmp6P0C0A3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp6P0C0A3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Chmp6P0C0A3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp6P0C0A3 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.01■□□□□ 0.63
Chmp6P0C0A3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Chmp6P0C0A3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp6P0C0A3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp6P0C0A3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms