Protein–RNA interactions for Protein: P09022

Hoxa1, Homeobox protein Hox-A1, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1P09022 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.32□□□□□ -0.12
Hoxa1P09022 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa1P09022 Gm7290-201ENSMUST00000104990 617 ntBASIC14.32□□□□□ -0.12
Hoxa1P09022 Gm12918-201ENSMUST00000120234 636 ntBASIC14.32□□□□□ -0.12
Hoxa1P09022 Gm15710-201ENSMUST00000121821 636 ntBASIC14.32□□□□□ -0.12
Hoxa1P09022 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxa1P09022 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa1P09022 Gm5075-201ENSMUST00000196916 622 ntBASIC14.32□□□□□ -0.12
Hoxa1P09022 Gm8969-201ENSMUST00000199694 526 ntBASIC14.32□□□□□ -0.12
Hoxa1P09022 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxa1P09022 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.32□□□□□ -0.12
Hoxa1P09022 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.32□□□□□ -0.12
Hoxa1P09022 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa1P09022 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxa1P09022 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa1P09022 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxa1P09022 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa1P09022 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa1P09022 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa1P09022 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa1P09022 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa1P09022 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa1P09022 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa1P09022 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.31□□□□□ -0.12
Hoxa1P09022 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Hoxa1P09022 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxa1P09022 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa1P09022 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hoxa1P09022 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.31□□□□□ -0.12
Hoxa1P09022 Gm42569-201ENSMUST00000200539 472 ntBASIC14.31□□□□□ -0.12
Hoxa1P09022 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.31□□□□□ -0.12
Hoxa1P09022 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.31□□□□□ -0.12
Hoxa1P09022 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa1P09022 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Hoxa1P09022 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa1P09022 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxa1P09022 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa1P09022 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa1P09022 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa1P09022 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa1P09022 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa1P09022 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.31□□□□□ -0.12
Hoxa1P09022 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa1P09022 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Hoxa1P09022 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hoxa1P09022 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa1P09022 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.3□□□□□ -0.12
Hoxa1P09022 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hoxa1P09022 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa1P09022 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.3□□□□□ -0.12
Hoxa1P09022 Gm7291-201ENSMUST00000199147 382 ntBASIC14.3□□□□□ -0.12
Hoxa1P09022 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.3□□□□□ -0.12
Hoxa1P09022 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa1P09022 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa1P09022 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
Hoxa1P09022 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa1P09022 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa1P09022 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa1P09022 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.3□□□□□ -0.12
Hoxa1P09022 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa1P09022 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa1P09022 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.3□□□□□ -0.12
Hoxa1P09022 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.3□□□□□ -0.12
Hoxa1P09022 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa1P09022 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.3□□□□□ -0.12
Hoxa1P09022 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa1P09022 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa1P09022 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Hoxa1P09022 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Gm6211-202ENSMUST00000167849 925 ntBASIC14.29□□□□□ -0.12
Hoxa1P09022 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hoxa1P09022 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa1P09022 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hoxa1P09022 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Hoxa1P09022 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa1P09022 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa1P09022 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa1P09022 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.28□□□□□ -0.12
Hoxa1P09022 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.28□□□□□ -0.12
Hoxa1P09022 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.28□□□□□ -0.12
Hoxa1P09022 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa1P09022 Gm8495-201ENSMUST00000188740 694 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms