Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06328 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
P06328 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.85□□□□□ -0.35
P06328 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06328 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06328 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06328 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06328 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P06328 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.85□□□□□ -0.35
P06328 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
P06328 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
P06328 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P06328 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06328 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
P06328 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06328 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06328 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06328 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06328 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06328 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.84□□□□□ -0.35
P06328 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06328 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
P06328 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06328 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06328 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06328 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.84□□□□□ -0.35
P06328 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
P06328 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P06328 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
P06328 Gm29791-202ENSMUST00000207888 369 ntBASIC12.84□□□□□ -0.35
P06328 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06328 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06328 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06328 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
P06328 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06328 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06328 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06328 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06328 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.84□□□□□ -0.35
P06328 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06328 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06328 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06328 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
P06328 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
P06328 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
P06328 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
P06328 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
P06328 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
P06328 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06328 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
P06328 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
P06328 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
P06328 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
P06328 Gm26571-201ENSMUST00000181399 666 ntBASIC12.83□□□□□ -0.36
P06328 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.83□□□□□ -0.36
P06328 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06328 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06328 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06328 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06328 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06328 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06328 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P06328 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06328 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06328 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
P06328 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06328 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
P06328 Gm10849-201ENSMUST00000100397 618 ntBASIC12.82□□□□□ -0.36
P06328 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P06328 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06328 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.82□□□□□ -0.36
P06328 Zfp783-201ENSMUST00000095946 670 ntBASIC12.82□□□□□ -0.36
P06328 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
P06328 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P06328 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06328 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06328 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.82□□□□□ -0.36
P06328 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
P06328 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
P06328 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.81□□□□□ -0.36
P06328 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P06328 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P06328 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P06328 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
P06328 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06328 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P06328 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.81□□□□□ -0.36
P06328 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06328 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.81□□□□□ -0.36
P06328 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.81□□□□□ -0.36
P06328 Gm44549-201ENSMUST00000208351 577 ntBASIC12.81□□□□□ -0.36
P06328 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06328 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06328 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
P06328 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06328 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
P06328 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06328 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06328 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.81□□□□□ -0.36
P06328 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms