Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PdgfrbP05622 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.72■□□□□ 0.43
PdgfrbP05622 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.72■□□□□ 0.43
PdgfrbP05622 Gm18025-201ENSMUST00000221733 862 ntBASIC17.72■□□□□ 0.43
PdgfrbP05622 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
PdgfrbP05622 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PdgfrbP05622 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.72■□□□□ 0.43
PdgfrbP05622 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PdgfrbP05622 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PdgfrbP05622 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PdgfrbP05622 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PdgfrbP05622 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PdgfrbP05622 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PdgfrbP05622 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PdgfrbP05622 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PdgfrbP05622 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.71■□□□□ 0.43
PdgfrbP05622 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PdgfrbP05622 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PdgfrbP05622 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PdgfrbP05622 Gm5643-201ENSMUST00000117081 966 ntBASIC17.71■□□□□ 0.43
PdgfrbP05622 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.71■□□□□ 0.43
PdgfrbP05622 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.71■□□□□ 0.43
PdgfrbP05622 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PdgfrbP05622 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PdgfrbP05622 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PdgfrbP05622 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PdgfrbP05622 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PdgfrbP05622 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
PdgfrbP05622 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfrbP05622 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfrbP05622 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfrbP05622 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.7■□□□□ 0.42
PdgfrbP05622 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.7■□□□□ 0.42
PdgfrbP05622 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfrbP05622 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfrbP05622 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfrbP05622 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfrbP05622 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfrbP05622 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.7■□□□□ 0.42
PdgfrbP05622 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.7■□□□□ 0.42
PdgfrbP05622 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.7■□□□□ 0.42
PdgfrbP05622 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PdgfrbP05622 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfrbP05622 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfrbP05622 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfrbP05622 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfrbP05622 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfrbP05622 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
PdgfrbP05622 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfrbP05622 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PdgfrbP05622 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PdgfrbP05622 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PdgfrbP05622 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
PdgfrbP05622 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PdgfrbP05622 Gm11643-201ENSMUST00000119578 864 ntBASIC17.69■□□□□ 0.42
PdgfrbP05622 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PdgfrbP05622 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.69■□□□□ 0.42
PdgfrbP05622 Gm6576-201ENSMUST00000169678 883 ntBASIC17.69■□□□□ 0.42
PdgfrbP05622 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PdgfrbP05622 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PdgfrbP05622 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PdgfrbP05622 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PdgfrbP05622 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PdgfrbP05622 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PdgfrbP05622 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.69■□□□□ 0.42
PdgfrbP05622 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PdgfrbP05622 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PdgfrbP05622 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PdgfrbP05622 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PdgfrbP05622 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PdgfrbP05622 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PdgfrbP05622 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PdgfrbP05622 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PdgfrbP05622 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.68■□□□□ 0.42
PdgfrbP05622 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PdgfrbP05622 Gm20760-201ENSMUST00000179197 648 ntBASIC17.68■□□□□ 0.42
PdgfrbP05622 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.68■□□□□ 0.42
PdgfrbP05622 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.68■□□□□ 0.42
PdgfrbP05622 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PdgfrbP05622 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PdgfrbP05622 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PdgfrbP05622 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PdgfrbP05622 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PdgfrbP05622 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PdgfrbP05622 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PdgfrbP05622 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.68■□□□□ 0.42
PdgfrbP05622 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PdgfrbP05622 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PdgfrbP05622 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PdgfrbP05622 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PdgfrbP05622 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PdgfrbP05622 Gm8969-201ENSMUST00000199694 526 ntBASIC17.67■□□□□ 0.42
PdgfrbP05622 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PdgfrbP05622 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PdgfrbP05622 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PdgfrbP05622 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PdgfrbP05622 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PdgfrbP05622 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.67■□□□□ 0.42
PdgfrbP05622 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PdgfrbP05622 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms